Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P03980 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P03980 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
P03980 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P03980 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.07■□□□□ 0.8
P03980 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P03980 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.06■□□□□ 0.8
P03980 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P03980 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P03980 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
P03980 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P03980 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P03980 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
P03980 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
P03980 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20■□□□□ 0.79
P03980 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
P03980 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P03980 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P03980 Zxda-201ENSMUST00000117281 2621 ntBASIC19.98■□□□□ 0.79
P03980 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P03980 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.97■□□□□ 0.79
P03980 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
P03980 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
P03980 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P03980 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.95■□□□□ 0.78
P03980 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P03980 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
P03980 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
P03980 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
P03980 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P03980 Mipep-204ENSMUST00000225043 1548 ntBASIC19.92■□□□□ 0.78
P03980 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P03980 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
P03980 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
P03980 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P03980 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P03980 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P03980 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P03980 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.87■□□□□ 0.77
P03980 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
P03980 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P03980 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
P03980 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
P03980 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
P03980 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.85■□□□□ 0.77
P03980 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.85■□□□□ 0.77
P03980 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
P03980 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P03980 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P03980 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.81■□□□□ 0.76
P03980 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
P03980 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
P03980 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
P03980 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P03980 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
P03980 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
P03980 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P03980 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P03980 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
P03980 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
P03980 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
P03980 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
P03980 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P03980 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
P03980 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
P03980 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P03980 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P03980 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
P03980 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P03980 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
P03980 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
P03980 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
P03980 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P03980 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
P03980 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P03980 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
P03980 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P03980 Amer2-203ENSMUST00000225247 2662 ntBASIC19.66■□□□□ 0.74
P03980 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
P03980 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
P03980 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
P03980 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
P03980 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
P03980 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
P03980 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
P03980 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
P03980 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
P03980 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
P03980 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P03980 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P03980 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P03980 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P03980 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
P03980 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P03980 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.51■□□□□ 0.71
P03980 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
P03980 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
P03980 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
P03980 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P03980 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms