Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.9■■□□□ 1.1
CfdP03953 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CfdP03953 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CfdP03953 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CfdP03953 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CfdP03953 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.85■■□□□ 1.09
CfdP03953 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CfdP03953 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CfdP03953 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CfdP03953 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
CfdP03953 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CfdP03953 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CfdP03953 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CfdP03953 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CfdP03953 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.81■■□□□ 1.08
CfdP03953 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CfdP03953 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CfdP03953 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CfdP03953 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CfdP03953 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CfdP03953 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CfdP03953 Gm25238-201ENSMUST00000174914 89 ntBASIC21.76■■□□□ 1.07
CfdP03953 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CfdP03953 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
CfdP03953 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.75■■□□□ 1.07
CfdP03953 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CfdP03953 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CfdP03953 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CfdP03953 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CfdP03953 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CfdP03953 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CfdP03953 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CfdP03953 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CfdP03953 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CfdP03953 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CfdP03953 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CfdP03953 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CfdP03953 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CfdP03953 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CfdP03953 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CfdP03953 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CfdP03953 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CfdP03953 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CfdP03953 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CfdP03953 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CfdP03953 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CfdP03953 Amer2-203ENSMUST00000225247 2662 ntBASIC21.6■■□□□ 1.05
CfdP03953 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CfdP03953 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CfdP03953 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.54■■□□□ 1.04
CfdP03953 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.54■■□□□ 1.04
CfdP03953 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CfdP03953 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CfdP03953 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CfdP03953 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CfdP03953 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CfdP03953 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CfdP03953 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CfdP03953 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CfdP03953 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CfdP03953 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
CfdP03953 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CfdP03953 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CfdP03953 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CfdP03953 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.45■■□□□ 1.02
CfdP03953 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CfdP03953 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.45■■□□□ 1.02
CfdP03953 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CfdP03953 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CfdP03953 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CfdP03953 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CfdP03953 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.41■■□□□ 1.02
CfdP03953 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CfdP03953 Mipep-204ENSMUST00000225043 1548 ntBASIC21.4■■□□□ 1.02
CfdP03953 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CfdP03953 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CfdP03953 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CfdP03953 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.39■■□□□ 1.01
CfdP03953 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CfdP03953 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CfdP03953 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CfdP03953 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CfdP03953 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CfdP03953 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
CfdP03953 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.35■■□□□ 1.01
CfdP03953 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CfdP03953 Rab21-202ENSMUST00000218831 843 ntBASIC21.33■■□□□ 1.01
CfdP03953 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.31■■□□□ 1
CfdP03953 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CfdP03953 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CfdP03953 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.28■■□□□ 1
CfdP03953 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.28■■□□□ 1
CfdP03953 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CfdP03953 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.25■□□□□ 0.99
CfdP03953 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.24■□□□□ 0.99
CfdP03953 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CfdP03953 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CfdP03953 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CfdP03953 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.23■□□□□ 0.99
CfdP03953 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms