Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TcraP01849 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TcraP01849 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TcraP01849 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TcraP01849 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TcraP01849 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TcraP01849 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TcraP01849 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TcraP01849 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TcraP01849 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TcraP01849 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TcraP01849 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TcraP01849 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TcraP01849 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TcraP01849 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TcraP01849 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TcraP01849 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TcraP01849 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TcraP01849 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TcraP01849 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TcraP01849 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TcraP01849 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TcraP01849 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TcraP01849 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TcraP01849 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
TcraP01849 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TcraP01849 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TcraP01849 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TcraP01849 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TcraP01849 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.56■□□□□ 0.56
TcraP01849 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TcraP01849 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TcraP01849 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TcraP01849 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TcraP01849 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TcraP01849 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
TcraP01849 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
TcraP01849 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TcraP01849 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.51■□□□□ 0.55
TcraP01849 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TcraP01849 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.5■□□□□ 0.55
TcraP01849 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TcraP01849 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TcraP01849 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.49■□□□□ 0.55
TcraP01849 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TcraP01849 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TcraP01849 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TcraP01849 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TcraP01849 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TcraP01849 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TcraP01849 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TcraP01849 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.43■□□□□ 0.54
TcraP01849 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TcraP01849 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TcraP01849 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.41■□□□□ 0.54
TcraP01849 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TcraP01849 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TcraP01849 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TcraP01849 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TcraP01849 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TcraP01849 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TcraP01849 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TcraP01849 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TcraP01849 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TcraP01849 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TcraP01849 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TcraP01849 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TcraP01849 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TcraP01849 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TcraP01849 Amer2-203ENSMUST00000225247 2662 ntBASIC18.33■□□□□ 0.52
TcraP01849 Rab21-202ENSMUST00000218831 843 ntBASIC18.32■□□□□ 0.52
TcraP01849 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TcraP01849 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TcraP01849 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TcraP01849 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TcraP01849 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TcraP01849 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.29■□□□□ 0.52
TcraP01849 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TcraP01849 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TcraP01849 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.27■□□□□ 0.52
TcraP01849 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TcraP01849 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TcraP01849 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TcraP01849 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TcraP01849 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TcraP01849 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TcraP01849 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TcraP01849 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TcraP01849 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TcraP01849 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.23■□□□□ 0.51
TcraP01849 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TcraP01849 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TcraP01849 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TcraP01849 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.21■□□□□ 0.51
TcraP01849 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TcraP01849 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TcraP01849 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TcraP01849 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TcraP01849 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TcraP01849 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms