Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01728 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
P01728 Gm25238-201ENSMUST00000174914 89 ntBASIC20.62■□□□□ 0.89
P01728 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01728 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01728 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01728 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
P01728 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01728 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01728 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01728 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01728 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.58■□□□□ 0.89
P01728 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
P01728 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.58■□□□□ 0.88
P01728 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
P01728 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P01728 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
P01728 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01728 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01728 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01728 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01728 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
P01728 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
P01728 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
P01728 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P01728 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
P01728 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
P01728 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
P01728 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
P01728 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
P01728 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
P01728 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P01728 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
P01728 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P01728 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
P01728 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
P01728 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
P01728 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
P01728 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
P01728 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
P01728 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.4■□□□□ 0.86
P01728 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.4■□□□□ 0.86
P01728 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
P01728 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P01728 Amer2-203ENSMUST00000225247 2662 ntBASIC20.37■□□□□ 0.85
P01728 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P01728 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P01728 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
P01728 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
P01728 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
P01728 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01728 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
P01728 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.29■□□□□ 0.84
P01728 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01728 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01728 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
P01728 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P01728 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
P01728 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
P01728 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
P01728 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01728 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
P01728 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
P01728 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.25■□□□□ 0.83
P01728 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.25■□□□□ 0.83
P01728 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
P01728 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01728 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P01728 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
P01728 Mipep-204ENSMUST00000225043 1548 ntBASIC20.24■□□□□ 0.83
P01728 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
P01728 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P01728 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P01728 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01728 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
P01728 Rab21-202ENSMUST00000218831 843 ntBASIC20.2■□□□□ 0.82
P01728 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.19■□□□□ 0.82
P01728 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01728 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.15■□□□□ 0.82
P01728 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
P01728 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
P01728 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
P01728 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01728 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01728 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.11■□□□□ 0.81
P01728 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.1■□□□□ 0.81
P01728 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01728 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01728 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.08■□□□□ 0.81
P01728 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
P01728 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.08■□□□□ 0.81
P01728 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.07■□□□□ 0.8
P01728 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01728 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
P01728 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01728 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01728 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01728 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01728 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01728 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms