Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Sh2b3O09039 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh2b3O09039 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Sh2b3O09039 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.22■■□□□ 1.31
Sh2b3O09039 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh2b3O09039 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.17■■□□□ 1.3
Sh2b3O09039 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh2b3O09039 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Sh2b3O09039 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sh2b3O09039 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Sh2b3O09039 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sh2b3O09039 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sh2b3O09039 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.1■■□□□ 1.29
Sh2b3O09039 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Sh2b3O09039 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Sh2b3O09039 Gm16148-201ENSMUST00000119653 893 ntBASIC23.08■■□□□ 1.29
Sh2b3O09039 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Sh2b3O09039 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sh2b3O09039 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh2b3O09039 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Sh2b3O09039 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh2b3O09039 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sh2b3O09039 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Sh2b3O09039 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Sh2b3O09039 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sh2b3O09039 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23■■□□□ 1.27
Sh2b3O09039 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sh2b3O09039 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Sh2b3O09039 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sh2b3O09039 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sh2b3O09039 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sh2b3O09039 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.96■■□□□ 1.27
Sh2b3O09039 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh2b3O09039 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh2b3O09039 Peli2-204ENSMUST00000226513 1320 ntBASIC22.93■■□□□ 1.26
Sh2b3O09039 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Sh2b3O09039 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Sh2b3O09039 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Sh2b3O09039 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Sh2b3O09039 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Sh2b3O09039 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Sh2b3O09039 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.88■■□□□ 1.25
Sh2b3O09039 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sh2b3O09039 Mipep-204ENSMUST00000225043 1548 ntBASIC22.87■■□□□ 1.25
Sh2b3O09039 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sh2b3O09039 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sh2b3O09039 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.85■■□□□ 1.25
Sh2b3O09039 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh2b3O09039 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sh2b3O09039 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.83■■□□□ 1.25
Sh2b3O09039 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
Sh2b3O09039 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sh2b3O09039 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.82■■□□□ 1.24
Sh2b3O09039 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sh2b3O09039 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sh2b3O09039 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.78■■□□□ 1.24
Sh2b3O09039 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sh2b3O09039 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Sh2b3O09039 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.76■■□□□ 1.23
Sh2b3O09039 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh2b3O09039 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sh2b3O09039 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh2b3O09039 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sh2b3O09039 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.73■■□□□ 1.23
Sh2b3O09039 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Sh2b3O09039 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Sh2b3O09039 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.72■■□□□ 1.23
Sh2b3O09039 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh2b3O09039 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.67■■□□□ 1.22
Sh2b3O09039 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Sh2b3O09039 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh2b3O09039 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh2b3O09039 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sh2b3O09039 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.63■■□□□ 1.21
Sh2b3O09039 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.63■■□□□ 1.21
Sh2b3O09039 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh2b3O09039 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh2b3O09039 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh2b3O09039 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.6■■□□□ 1.21
Sh2b3O09039 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.59■■□□□ 1.21
Sh2b3O09039 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh2b3O09039 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sh2b3O09039 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Sh2b3O09039 Gm45855-201ENSMUST00000212546 880 ntBASIC22.55■■□□□ 1.2
Sh2b3O09039 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh2b3O09039 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh2b3O09039 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Sh2b3O09039 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sh2b3O09039 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh2b3O09039 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sh2b3O09039 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.51■■□□□ 1.19
Sh2b3O09039 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh2b3O09039 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Sh2b3O09039 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sh2b3O09039 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.46■■□□□ 1.19
Sh2b3O09039 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh2b3O09039 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Sh2b3O09039 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Sh2b3O09039 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh2b3O09039 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms