Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.61■■■□□ 2.49
B020004C17RikJ3QP07 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
B020004C17RikJ3QP07 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
B020004C17RikJ3QP07 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
B020004C17RikJ3QP07 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
B020004C17RikJ3QP07 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
B020004C17RikJ3QP07 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
B020004C17RikJ3QP07 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
B020004C17RikJ3QP07 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.53■■■□□ 2.48
B020004C17RikJ3QP07 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
B020004C17RikJ3QP07 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
B020004C17RikJ3QP07 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.47■■■□□ 2.47
B020004C17RikJ3QP07 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.46■■■□□ 2.47
B020004C17RikJ3QP07 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
B020004C17RikJ3QP07 Gm45855-201ENSMUST00000212546 880 ntBASIC30.42■■■□□ 2.46
B020004C17RikJ3QP07 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
B020004C17RikJ3QP07 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
B020004C17RikJ3QP07 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
B020004C17RikJ3QP07 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
B020004C17RikJ3QP07 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
B020004C17RikJ3QP07 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
B020004C17RikJ3QP07 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
B020004C17RikJ3QP07 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
B020004C17RikJ3QP07 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.34■■■□□ 2.45
B020004C17RikJ3QP07 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
B020004C17RikJ3QP07 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
B020004C17RikJ3QP07 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
B020004C17RikJ3QP07 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
B020004C17RikJ3QP07 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
B020004C17RikJ3QP07 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
B020004C17RikJ3QP07 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
B020004C17RikJ3QP07 Gm9397-201ENSMUST00000200125 605 ntBASIC30.25■■■□□ 2.43
B020004C17RikJ3QP07 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
B020004C17RikJ3QP07 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
B020004C17RikJ3QP07 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
B020004C17RikJ3QP07 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.17■■■□□ 2.42
B020004C17RikJ3QP07 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.16■■■□□ 2.42
B020004C17RikJ3QP07 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
B020004C17RikJ3QP07 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
B020004C17RikJ3QP07 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.13■■■□□ 2.41
B020004C17RikJ3QP07 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
B020004C17RikJ3QP07 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
B020004C17RikJ3QP07 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
B020004C17RikJ3QP07 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
B020004C17RikJ3QP07 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
B020004C17RikJ3QP07 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
B020004C17RikJ3QP07 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.07■■■□□ 2.4
B020004C17RikJ3QP07 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.07■■■□□ 2.4
B020004C17RikJ3QP07 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
B020004C17RikJ3QP07 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
B020004C17RikJ3QP07 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
B020004C17RikJ3QP07 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
B020004C17RikJ3QP07 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.03■■■□□ 2.4
B020004C17RikJ3QP07 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.03■■■□□ 2.4
B020004C17RikJ3QP07 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
B020004C17RikJ3QP07 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.02■■■□□ 2.4
B020004C17RikJ3QP07 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30■■■□□ 2.39
B020004C17RikJ3QP07 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
B020004C17RikJ3QP07 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
B020004C17RikJ3QP07 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
B020004C17RikJ3QP07 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.97■■■□□ 2.39
B020004C17RikJ3QP07 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
B020004C17RikJ3QP07 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
B020004C17RikJ3QP07 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
B020004C17RikJ3QP07 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
B020004C17RikJ3QP07 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
B020004C17RikJ3QP07 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
B020004C17RikJ3QP07 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
B020004C17RikJ3QP07 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
B020004C17RikJ3QP07 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
B020004C17RikJ3QP07 Gm24970-201ENSMUST00000175582 82 ntBASIC29.88■■■□□ 2.37
B020004C17RikJ3QP07 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.88■■■□□ 2.37
B020004C17RikJ3QP07 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
B020004C17RikJ3QP07 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
B020004C17RikJ3QP07 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
B020004C17RikJ3QP07 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
B020004C17RikJ3QP07 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
B020004C17RikJ3QP07 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
B020004C17RikJ3QP07 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.81■■■□□ 2.36
B020004C17RikJ3QP07 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.81■■■□□ 2.36
B020004C17RikJ3QP07 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
B020004C17RikJ3QP07 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
B020004C17RikJ3QP07 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.75■■■□□ 2.35
B020004C17RikJ3QP07 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.74■■■□□ 2.35
B020004C17RikJ3QP07 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
B020004C17RikJ3QP07 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
B020004C17RikJ3QP07 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
B020004C17RikJ3QP07 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
B020004C17RikJ3QP07 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.7■■■□□ 2.34
B020004C17RikJ3QP07 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
B020004C17RikJ3QP07 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
B020004C17RikJ3QP07 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
B020004C17RikJ3QP07 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
B020004C17RikJ3QP07 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
B020004C17RikJ3QP07 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
B020004C17RikJ3QP07 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
B020004C17RikJ3QP07 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
B020004C17RikJ3QP07 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
B020004C17RikJ3QP07 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
B020004C17RikJ3QP07 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 172.5 ms