Protein–RNA interactions for Protein: J3JS27

Vmn1r194, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r194J3JS27 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.95■□□□□ 0.94
Vmn1r194J3JS27 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vmn1r194J3JS27 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vmn1r194J3JS27 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vmn1r194J3JS27 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Vmn1r194J3JS27 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.91■□□□□ 0.94
Vmn1r194J3JS27 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Vmn1r194J3JS27 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vmn1r194J3JS27 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vmn1r194J3JS27 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.89■□□□□ 0.94
Vmn1r194J3JS27 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vmn1r194J3JS27 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vmn1r194J3JS27 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vmn1r194J3JS27 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.87■□□□□ 0.93
Vmn1r194J3JS27 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vmn1r194J3JS27 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vmn1r194J3JS27 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.85■□□□□ 0.93
Vmn1r194J3JS27 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.85■□□□□ 0.93
Vmn1r194J3JS27 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.84■□□□□ 0.93
Vmn1r194J3JS27 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vmn1r194J3JS27 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vmn1r194J3JS27 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vmn1r194J3JS27 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vmn1r194J3JS27 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vmn1r194J3JS27 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vmn1r194J3JS27 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vmn1r194J3JS27 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vmn1r194J3JS27 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vmn1r194J3JS27 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vmn1r194J3JS27 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vmn1r194J3JS27 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vmn1r194J3JS27 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmn1r194J3JS27 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmn1r194J3JS27 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vmn1r194J3JS27 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r194J3JS27 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r194J3JS27 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vmn1r194J3JS27 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r194J3JS27 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vmn1r194J3JS27 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.7■□□□□ 0.9
Vmn1r194J3JS27 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.68■□□□□ 0.9
Vmn1r194J3JS27 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
Vmn1r194J3JS27 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vmn1r194J3JS27 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r194J3JS27 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r194J3JS27 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r194J3JS27 Gm26115-201ENSMUST00000175605 87 ntBASIC20.65■□□□□ 0.9
Vmn1r194J3JS27 Gm8109-201ENSMUST00000194076 746 ntBASIC20.65■□□□□ 0.9
Vmn1r194J3JS27 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r194J3JS27 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r194J3JS27 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vmn1r194J3JS27 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r194J3JS27 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r194J3JS27 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Vmn1r194J3JS27 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Vmn1r194J3JS27 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Vmn1r194J3JS27 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Vmn1r194J3JS27 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r194J3JS27 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r194J3JS27 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r194J3JS27 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.6■□□□□ 0.89
Vmn1r194J3JS27 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Vmn1r194J3JS27 Gm27322-201ENSMUST00000184007 104 ntBASIC20.6■□□□□ 0.89
Vmn1r194J3JS27 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vmn1r194J3JS27 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vmn1r194J3JS27 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Vmn1r194J3JS27 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Vmn1r194J3JS27 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r194J3JS27 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r194J3JS27 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.54■□□□□ 0.88
Vmn1r194J3JS27 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r194J3JS27 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r194J3JS27 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Vmn1r194J3JS27 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r194J3JS27 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vmn1r194J3JS27 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r194J3JS27 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r194J3JS27 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r194J3JS27 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.5■□□□□ 0.87
Vmn1r194J3JS27 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r194J3JS27 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r194J3JS27 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Vmn1r194J3JS27 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r194J3JS27 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r194J3JS27 Mipep-204ENSMUST00000225043 1548 ntBASIC20.45■□□□□ 0.86
Vmn1r194J3JS27 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r194J3JS27 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r194J3JS27 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.42■□□□□ 0.86
Vmn1r194J3JS27 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r194J3JS27 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r194J3JS27 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r194J3JS27 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.39■□□□□ 0.86
Vmn1r194J3JS27 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.38■□□□□ 0.85
Vmn1r194J3JS27 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r194J3JS27 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r194J3JS27 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r194J3JS27 Amer2-203ENSMUST00000225247 2662 ntBASIC20.35■□□□□ 0.85
Vmn1r194J3JS27 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r194J3JS27 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Vmn1r194J3JS27 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms