Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28038F7BCN9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28038F7BCN9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm28038F7BCN9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm28038F7BCN9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm28038F7BCN9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28038F7BCN9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Gm28038F7BCN9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gm28038F7BCN9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Gm28038F7BCN9 Zxda-201ENSMUST00000117281 2621 ntBASIC19.01■□□□□ 0.63
Gm28038F7BCN9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.99■□□□□ 0.63
Gm28038F7BCN9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm28038F7BCN9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Gm28038F7BCN9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm28038F7BCN9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm28038F7BCN9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.97■□□□□ 0.63
Gm28038F7BCN9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.96■□□□□ 0.63
Gm28038F7BCN9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28038F7BCN9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm28038F7BCN9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28038F7BCN9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm28038F7BCN9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28038F7BCN9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28038F7BCN9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Gm28038F7BCN9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28038F7BCN9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Gm28038F7BCN9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gm28038F7BCN9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.93■□□□□ 0.62
Gm28038F7BCN9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28038F7BCN9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28038F7BCN9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.9■□□□□ 0.62
Gm28038F7BCN9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.9■□□□□ 0.62
Gm28038F7BCN9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28038F7BCN9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28038F7BCN9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm28038F7BCN9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28038F7BCN9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Gm28038F7BCN9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28038F7BCN9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28038F7BCN9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28038F7BCN9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Gm28038F7BCN9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28038F7BCN9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28038F7BCN9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28038F7BCN9 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.88■□□□□ 0.61
Gm28038F7BCN9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28038F7BCN9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28038F7BCN9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28038F7BCN9 Rab21-202ENSMUST00000218831 843 ntBASIC18.84■□□□□ 0.61
Gm28038F7BCN9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28038F7BCN9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28038F7BCN9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28038F7BCN9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Gm28038F7BCN9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gm28038F7BCN9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28038F7BCN9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28038F7BCN9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28038F7BCN9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Gm28038F7BCN9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28038F7BCN9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28038F7BCN9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28038F7BCN9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28038F7BCN9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm28038F7BCN9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm28038F7BCN9 Mipep-204ENSMUST00000225043 1548 ntBASIC18.78■□□□□ 0.6
Gm28038F7BCN9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Gm28038F7BCN9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28038F7BCN9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Gm28038F7BCN9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28038F7BCN9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28038F7BCN9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28038F7BCN9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28038F7BCN9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28038F7BCN9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28038F7BCN9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28038F7BCN9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm28038F7BCN9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28038F7BCN9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28038F7BCN9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm28038F7BCN9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm28038F7BCN9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm28038F7BCN9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Gm28038F7BCN9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm28038F7BCN9 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.64■□□□□ 0.57
Gm28038F7BCN9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Gm28038F7BCN9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Gm28038F7BCN9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm28038F7BCN9 Amer2-203ENSMUST00000225247 2662 ntBASIC18.63■□□□□ 0.57
Gm28038F7BCN9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28038F7BCN9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm28038F7BCN9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28038F7BCN9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm28038F7BCN9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm28038F7BCN9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28038F7BCN9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Gm28038F7BCN9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28038F7BCN9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28038F7BCN9 Gm25262-201ENSMUST00000174934 133 ntBASIC18.58■□□□□ 0.56
Gm28038F7BCN9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28038F7BCN9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms