Protein–RNA interactions for Protein: E9Q5K9

Ythdc1, YTH domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdc1E9Q5K9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Ythdc1E9Q5K9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ythdc1E9Q5K9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Ythdc1E9Q5K9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Ythdc1E9Q5K9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Ythdc1E9Q5K9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Ythdc1E9Q5K9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ythdc1E9Q5K9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ythdc1E9Q5K9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ythdc1E9Q5K9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ythdc1E9Q5K9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ythdc1E9Q5K9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Ythdc1E9Q5K9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Ythdc1E9Q5K9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ythdc1E9Q5K9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ythdc1E9Q5K9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ythdc1E9Q5K9 Peli2-204ENSMUST00000226513 1320 ntBASIC31.02■■■□□ 2.56
Ythdc1E9Q5K9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Ythdc1E9Q5K9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ythdc1E9Q5K9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ythdc1E9Q5K9 Gm16148-201ENSMUST00000119653 893 ntBASIC31■■■□□ 2.55
Ythdc1E9Q5K9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Ythdc1E9Q5K9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ythdc1E9Q5K9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
Ythdc1E9Q5K9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ythdc1E9Q5K9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
Ythdc1E9Q5K9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.97■■■□□ 2.55
Ythdc1E9Q5K9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ythdc1E9Q5K9 Zfp131-205ENSMUST00000223812 663 ntBASIC30.96■■■□□ 2.55
Ythdc1E9Q5K9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Ythdc1E9Q5K9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
Ythdc1E9Q5K9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Ythdc1E9Q5K9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.94■■■□□ 2.54
Ythdc1E9Q5K9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ythdc1E9Q5K9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
Ythdc1E9Q5K9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ythdc1E9Q5K9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ythdc1E9Q5K9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ythdc1E9Q5K9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Ythdc1E9Q5K9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
Ythdc1E9Q5K9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Ythdc1E9Q5K9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ythdc1E9Q5K9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.87■■■□□ 2.53
Ythdc1E9Q5K9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.8■■■□□ 2.52
Ythdc1E9Q5K9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ythdc1E9Q5K9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Ythdc1E9Q5K9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.76■■■□□ 2.51
Ythdc1E9Q5K9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Ythdc1E9Q5K9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ythdc1E9Q5K9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Ythdc1E9Q5K9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ythdc1E9Q5K9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Ythdc1E9Q5K9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ythdc1E9Q5K9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.72■■■□□ 2.51
Ythdc1E9Q5K9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Ythdc1E9Q5K9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ythdc1E9Q5K9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
Ythdc1E9Q5K9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
Ythdc1E9Q5K9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Ythdc1E9Q5K9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Ythdc1E9Q5K9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.66■■■□□ 2.5
Ythdc1E9Q5K9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Ythdc1E9Q5K9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Ythdc1E9Q5K9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ythdc1E9Q5K9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ythdc1E9Q5K9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.61■■■□□ 2.49
Ythdc1E9Q5K9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ythdc1E9Q5K9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ythdc1E9Q5K9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ythdc1E9Q5K9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ythdc1E9Q5K9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ythdc1E9Q5K9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Ythdc1E9Q5K9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.54■■■□□ 2.48
Ythdc1E9Q5K9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ythdc1E9Q5K9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
Ythdc1E9Q5K9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Ythdc1E9Q5K9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ythdc1E9Q5K9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.5■■■□□ 2.47
Ythdc1E9Q5K9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ythdc1E9Q5K9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ythdc1E9Q5K9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.46■■■□□ 2.47
Ythdc1E9Q5K9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.46■■■□□ 2.47
Ythdc1E9Q5K9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ythdc1E9Q5K9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
Ythdc1E9Q5K9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ythdc1E9Q5K9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ythdc1E9Q5K9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ythdc1E9Q5K9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ythdc1E9Q5K9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Ythdc1E9Q5K9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
Ythdc1E9Q5K9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ythdc1E9Q5K9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Ythdc1E9Q5K9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ythdc1E9Q5K9 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.33■■■□□ 2.45
Ythdc1E9Q5K9 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.32■■■□□ 2.44
Ythdc1E9Q5K9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Ythdc1E9Q5K9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ythdc1E9Q5K9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ythdc1E9Q5K9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ythdc1E9Q5K9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms