Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC13.65□□□□□ -0.22
Rnf213E9Q555 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf213E9Q555 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC13.64□□□□□ -0.23
Rnf213E9Q555 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf213E9Q555 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf213E9Q555 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf213E9Q555 Gm42596-201ENSMUST00000196305 1958 ntBASIC13.62□□□□□ -0.23
Rnf213E9Q555 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rnf213E9Q555 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf213E9Q555 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf213E9Q555 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf213E9Q555 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC13.59□□□□□ -0.23
Rnf213E9Q555 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf213E9Q555 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf213E9Q555 Gm10524-201ENSMUST00000181931 1893 ntBASIC13.58□□□□□ -0.24
Rnf213E9Q555 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf213E9Q555 CT025624.2-201ENSMUST00000223609 1909 ntBASIC13.57□□□□□ -0.24
Rnf213E9Q555 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Rnf213E9Q555 Gm8503-201ENSMUST00000118131 455 ntBASIC13.57□□□□□ -0.24
Rnf213E9Q555 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf213E9Q555 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf213E9Q555 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf213E9Q555 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf213E9Q555 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC13.54□□□□□ -0.24
Rnf213E9Q555 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC13.52□□□□□ -0.24
Rnf213E9Q555 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC13.52□□□□□ -0.25
Rnf213E9Q555 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf213E9Q555 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf213E9Q555 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rnf213E9Q555 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Rnf213E9Q555 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf213E9Q555 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf213E9Q555 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC13.48□□□□□ -0.25
Rnf213E9Q555 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf213E9Q555 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rnf213E9Q555 Gm24970-201ENSMUST00000175582 82 ntBASIC13.46□□□□□ -0.25
Rnf213E9Q555 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC13.46□□□□□ -0.25
Rnf213E9Q555 Gm9939-201ENSMUST00000067161 1154 ntBASIC13.44□□□□□ -0.26
Rnf213E9Q555 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf213E9Q555 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.43□□□□□ -0.26
Rnf213E9Q555 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rnf213E9Q555 Gm6821-201ENSMUST00000107540 542 ntBASIC13.42□□□□□ -0.26
Rnf213E9Q555 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rnf213E9Q555 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf213E9Q555 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf213E9Q555 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf213E9Q555 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf213E9Q555 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf213E9Q555 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf213E9Q555 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf213E9Q555 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf213E9Q555 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf213E9Q555 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf213E9Q555 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf213E9Q555 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf213E9Q555 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf213E9Q555 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf213E9Q555 Gm15039-201ENSMUST00000118914 875 ntBASIC13.31□□□□□ -0.28
Rnf213E9Q555 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf213E9Q555 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.31□□□□□ -0.28
Rnf213E9Q555 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf213E9Q555 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf213E9Q555 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf213E9Q555 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf213E9Q555 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf213E9Q555 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf213E9Q555 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf213E9Q555 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf213E9Q555 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Rnf213E9Q555 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rnf213E9Q555 Zfp131-207ENSMUST00000224946 1783 ntBASIC13.24□□□□□ -0.29
Rnf213E9Q555 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf213E9Q555 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf213E9Q555 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf213E9Q555 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC13.21□□□□□ -0.29
Rnf213E9Q555 Mir6538-201ENSMUST00000183713 110 ntBASIC13.21□□□□□ -0.3
Rnf213E9Q555 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rnf213E9Q555 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf213E9Q555 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rnf213E9Q555 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf213E9Q555 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf213E9Q555 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC13.18□□□□□ -0.3
Rnf213E9Q555 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf213E9Q555 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf213E9Q555 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf213E9Q555 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf213E9Q555 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rnf213E9Q555 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.14□□□□□ -0.31
Rnf213E9Q555 Gm11175-201ENSMUST00000116172 543 ntBASIC13.14□□□□□ -0.31
Rnf213E9Q555 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rnf213E9Q555 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Rnf213E9Q555 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf213E9Q555 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf213E9Q555 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf213E9Q555 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf213E9Q555 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf213E9Q555 Mipep-204ENSMUST00000225043 1548 ntBASIC13.1□□□□□ -0.31
Rnf213E9Q555 Gm42809-201ENSMUST00000198429 1138 ntBASIC13.1□□□□□ -0.31
Rnf213E9Q555 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf213E9Q555 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms