Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc71lE9Q4T4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc71lE9Q4T4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc71lE9Q4T4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc71lE9Q4T4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc71lE9Q4T4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc71lE9Q4T4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc71lE9Q4T4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc71lE9Q4T4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.2■□□□□ 0.82
Ccdc71lE9Q4T4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc71lE9Q4T4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc71lE9Q4T4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc71lE9Q4T4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc71lE9Q4T4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc71lE9Q4T4 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.16■□□□□ 0.82
Ccdc71lE9Q4T4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc71lE9Q4T4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.15■□□□□ 0.82
Ccdc71lE9Q4T4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc71lE9Q4T4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc71lE9Q4T4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc71lE9Q4T4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ccdc71lE9Q4T4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc71lE9Q4T4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccdc71lE9Q4T4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc71lE9Q4T4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc71lE9Q4T4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc71lE9Q4T4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc71lE9Q4T4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc71lE9Q4T4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc71lE9Q4T4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc71lE9Q4T4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc71lE9Q4T4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc71lE9Q4T4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc71lE9Q4T4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccdc71lE9Q4T4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc71lE9Q4T4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc71lE9Q4T4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc71lE9Q4T4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.01■□□□□ 0.79
Ccdc71lE9Q4T4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc71lE9Q4T4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc71lE9Q4T4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc71lE9Q4T4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc71lE9Q4T4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc71lE9Q4T4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc71lE9Q4T4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc71lE9Q4T4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ccdc71lE9Q4T4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc71lE9Q4T4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc71lE9Q4T4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc71lE9Q4T4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Ccdc71lE9Q4T4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc71lE9Q4T4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc71lE9Q4T4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc71lE9Q4T4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71lE9Q4T4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71lE9Q4T4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71lE9Q4T4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71lE9Q4T4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71lE9Q4T4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71lE9Q4T4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc71lE9Q4T4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc71lE9Q4T4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc71lE9Q4T4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc71lE9Q4T4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc71lE9Q4T4 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.84■□□□□ 0.77
Ccdc71lE9Q4T4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ccdc71lE9Q4T4 Mipep-204ENSMUST00000225043 1548 ntBASIC19.84■□□□□ 0.77
Ccdc71lE9Q4T4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ccdc71lE9Q4T4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Ccdc71lE9Q4T4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc71lE9Q4T4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc71lE9Q4T4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc71lE9Q4T4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc71lE9Q4T4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc71lE9Q4T4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.8■□□□□ 0.76
Ccdc71lE9Q4T4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.79■□□□□ 0.76
Ccdc71lE9Q4T4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc71lE9Q4T4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc71lE9Q4T4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc71lE9Q4T4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc71lE9Q4T4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc71lE9Q4T4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc71lE9Q4T4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc71lE9Q4T4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc71lE9Q4T4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc71lE9Q4T4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc71lE9Q4T4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc71lE9Q4T4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc71lE9Q4T4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc71lE9Q4T4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc71lE9Q4T4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc71lE9Q4T4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc71lE9Q4T4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc71lE9Q4T4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc71lE9Q4T4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc71lE9Q4T4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc71lE9Q4T4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc71lE9Q4T4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc71lE9Q4T4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc71lE9Q4T4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms