Protein–RNA interactions for Protein: E9PW43

Gm10320, Protein transport protein Sec61 subunit beta, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10320E9PW43 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm10320E9PW43 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm10320E9PW43 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm10320E9PW43 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm10320E9PW43 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Gm10320E9PW43 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Gm10320E9PW43 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC16.55■□□□□ 0.24
Gm10320E9PW43 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm10320E9PW43 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm10320E9PW43 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm10320E9PW43 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10320E9PW43 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10320E9PW43 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Gm10320E9PW43 Gm25238-201ENSMUST00000174914 89 ntBASIC16.52■□□□□ 0.24
Gm10320E9PW43 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm10320E9PW43 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.51■□□□□ 0.23
Gm10320E9PW43 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10320E9PW43 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10320E9PW43 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10320E9PW43 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm10320E9PW43 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm10320E9PW43 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Gm10320E9PW43 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm10320E9PW43 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10320E9PW43 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm10320E9PW43 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm10320E9PW43 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm10320E9PW43 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Gm10320E9PW43 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gm10320E9PW43 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm10320E9PW43 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm10320E9PW43 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10320E9PW43 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10320E9PW43 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm10320E9PW43 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.43■□□□□ 0.22
Gm10320E9PW43 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm10320E9PW43 Amer2-203ENSMUST00000225247 2662 ntBASIC16.42■□□□□ 0.22
Gm10320E9PW43 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm10320E9PW43 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm10320E9PW43 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Gm10320E9PW43 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm10320E9PW43 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10320E9PW43 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10320E9PW43 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10320E9PW43 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gm10320E9PW43 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm10320E9PW43 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm10320E9PW43 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Gm10320E9PW43 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Gm10320E9PW43 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm10320E9PW43 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm10320E9PW43 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gm10320E9PW43 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm10320E9PW43 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Gm10320E9PW43 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm10320E9PW43 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm10320E9PW43 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10320E9PW43 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10320E9PW43 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm10320E9PW43 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gm10320E9PW43 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Gm10320E9PW43 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10320E9PW43 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Gm10320E9PW43 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm10320E9PW43 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10320E9PW43 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Gm10320E9PW43 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10320E9PW43 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10320E9PW43 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm10320E9PW43 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.23■□□□□ 0.19
Gm10320E9PW43 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.23■□□□□ 0.19
Gm10320E9PW43 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm10320E9PW43 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm10320E9PW43 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm10320E9PW43 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm10320E9PW43 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm10320E9PW43 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm10320E9PW43 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Gm10320E9PW43 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm10320E9PW43 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.14■□□□□ 0.17
Gm10320E9PW43 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm10320E9PW43 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10320E9PW43 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10320E9PW43 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10320E9PW43 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Gm10320E9PW43 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm10320E9PW43 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.13■□□□□ 0.17
Gm10320E9PW43 Mipep-204ENSMUST00000225043 1548 ntBASIC16.13■□□□□ 0.17
Gm10320E9PW43 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10320E9PW43 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10320E9PW43 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10320E9PW43 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm10320E9PW43 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm10320E9PW43 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm10320E9PW43 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm10320E9PW43 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm10320E9PW43 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm10320E9PW43 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm10320E9PW43 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm10320E9PW43 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms