Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
Hfm1D3Z4R1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC38.93■■■■□ 3.82
Hfm1D3Z4R1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
Hfm1D3Z4R1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
Hfm1D3Z4R1 Gm45855-201ENSMUST00000212546 880 ntBASIC38.85■■■■□ 3.81
Hfm1D3Z4R1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC38.85■■■■□ 3.81
Hfm1D3Z4R1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Hfm1D3Z4R1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC38.83■■■■□ 3.81
Hfm1D3Z4R1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC38.75■■■■□ 3.79
Hfm1D3Z4R1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC38.67■■■■□ 3.78
Hfm1D3Z4R1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC38.67■■■■□ 3.78
Hfm1D3Z4R1 Gm9397-201ENSMUST00000200125 605 ntBASIC38.63■■■■□ 3.78
Hfm1D3Z4R1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC38.63■■■■□ 3.78
Hfm1D3Z4R1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
Hfm1D3Z4R1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
Hfm1D3Z4R1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
Hfm1D3Z4R1 Mipep-204ENSMUST00000225043 1548 ntBASIC38.61■■■■□ 3.77
Hfm1D3Z4R1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Hfm1D3Z4R1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC38.58■■■■□ 3.77
Hfm1D3Z4R1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC38.57■■■■□ 3.77
Hfm1D3Z4R1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
Hfm1D3Z4R1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC38.55■■■■□ 3.76
Hfm1D3Z4R1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
Hfm1D3Z4R1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
Hfm1D3Z4R1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC38.53■■■■□ 3.76
Hfm1D3Z4R1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
Hfm1D3Z4R1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
Hfm1D3Z4R1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
Hfm1D3Z4R1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Hfm1D3Z4R1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
Hfm1D3Z4R1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC38.46■■■■□ 3.75
Hfm1D3Z4R1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC38.44■■■■□ 3.74
Hfm1D3Z4R1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC38.43■■■■□ 3.74
Hfm1D3Z4R1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC38.43■■■■□ 3.74
Hfm1D3Z4R1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
Hfm1D3Z4R1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC38.43■■■■□ 3.74
Hfm1D3Z4R1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC38.42■■■■□ 3.74
Hfm1D3Z4R1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
Hfm1D3Z4R1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC38.35■■■■□ 3.73
Hfm1D3Z4R1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Hfm1D3Z4R1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Hfm1D3Z4R1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC38.33■■■■□ 3.73
Hfm1D3Z4R1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
Hfm1D3Z4R1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
Hfm1D3Z4R1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC38.31■■■■□ 3.72
Hfm1D3Z4R1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC38.29■■■■□ 3.72
Hfm1D3Z4R1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC38.28■■■■□ 3.72
Hfm1D3Z4R1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Hfm1D3Z4R1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
Hfm1D3Z4R1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC38.27■■■■□ 3.72
Hfm1D3Z4R1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC38.24■■■■□ 3.71
Hfm1D3Z4R1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC38.24■■■■□ 3.71
Hfm1D3Z4R1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
Hfm1D3Z4R1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC38.19■■■■□ 3.7
Hfm1D3Z4R1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
Hfm1D3Z4R1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC38.17■■■■□ 3.7
Hfm1D3Z4R1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
Hfm1D3Z4R1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
Hfm1D3Z4R1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC38.08■■■■□ 3.69
Hfm1D3Z4R1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC38.07■■■■□ 3.69
Hfm1D3Z4R1 Gm5987-201ENSMUST00000196433 1151 ntBASIC38.07■■■■□ 3.69
Hfm1D3Z4R1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC38.05■■■■□ 3.68
Hfm1D3Z4R1 Gm24970-201ENSMUST00000175582 82 ntBASIC38.04■■■■□ 3.68
Hfm1D3Z4R1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Hfm1D3Z4R1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC38■■■■□ 3.67
Hfm1D3Z4R1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC37.97■■■■□ 3.67
Hfm1D3Z4R1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC37.97■■■■□ 3.67
Hfm1D3Z4R1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC37.96■■■■□ 3.67
Hfm1D3Z4R1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
Hfm1D3Z4R1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
Hfm1D3Z4R1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC37.93■■■■□ 3.66
Hfm1D3Z4R1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
Hfm1D3Z4R1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC37.92■■■■□ 3.66
Hfm1D3Z4R1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC37.91■■■■□ 3.66
Hfm1D3Z4R1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC37.87■■■■□ 3.65
Hfm1D3Z4R1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Hfm1D3Z4R1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC37.8■■■■□ 3.64
Hfm1D3Z4R1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Hfm1D3Z4R1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
Hfm1D3Z4R1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC37.74■■■■□ 3.63
Hfm1D3Z4R1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC37.74■■■■□ 3.63
Hfm1D3Z4R1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Hfm1D3Z4R1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Hfm1D3Z4R1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC37.71■■■■□ 3.63
Hfm1D3Z4R1 Gm8503-201ENSMUST00000118131 455 ntBASIC37.7■■■■□ 3.62
Hfm1D3Z4R1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
Hfm1D3Z4R1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
Hfm1D3Z4R1 Gm9939-201ENSMUST00000067161 1154 ntBASIC37.67■■■■□ 3.62
Hfm1D3Z4R1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
Hfm1D3Z4R1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC37.66■■■■□ 3.62
Hfm1D3Z4R1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC37.65■■■■□ 3.62
Hfm1D3Z4R1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Hfm1D3Z4R1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
Hfm1D3Z4R1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
Hfm1D3Z4R1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC37.61■■■■□ 3.61
Hfm1D3Z4R1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.61
Hfm1D3Z4R1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC37.57■■■■□ 3.6
Hfm1D3Z4R1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC37.57■■■■□ 3.6
Hfm1D3Z4R1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Hfm1D3Z4R1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC37.54■■■■□ 3.6
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms