Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mmp27D3YV89 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Mmp27D3YV89 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mmp27D3YV89 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Mmp27D3YV89 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mmp27D3YV89 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mmp27D3YV89 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Mmp27D3YV89 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Mmp27D3YV89 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mmp27D3YV89 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mmp27D3YV89 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Mmp27D3YV89 Gm8109-201ENSMUST00000194076 746 ntBASIC21.55■■□□□ 1.04
Mmp27D3YV89 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mmp27D3YV89 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.53■■□□□ 1.04
Mmp27D3YV89 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mmp27D3YV89 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp27D3YV89 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
Mmp27D3YV89 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp27D3YV89 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp27D3YV89 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mmp27D3YV89 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mmp27D3YV89 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mmp27D3YV89 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mmp27D3YV89 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp27D3YV89 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp27D3YV89 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp27D3YV89 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Mmp27D3YV89 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp27D3YV89 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp27D3YV89 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Mmp27D3YV89 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp27D3YV89 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.42■■□□□ 1.02
Mmp27D3YV89 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp27D3YV89 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
Mmp27D3YV89 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Mmp27D3YV89 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.4■■□□□ 1.02
Mmp27D3YV89 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.39■■□□□ 1.01
Mmp27D3YV89 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp27D3YV89 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp27D3YV89 Gm27322-201ENSMUST00000184007 104 ntBASIC21.38■■□□□ 1.01
Mmp27D3YV89 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Mmp27D3YV89 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Mmp27D3YV89 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp27D3YV89 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp27D3YV89 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp27D3YV89 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp27D3YV89 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp27D3YV89 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Mmp27D3YV89 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Mmp27D3YV89 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.32■■□□□ 1
Mmp27D3YV89 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.32■■□□□ 1
Mmp27D3YV89 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp27D3YV89 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mmp27D3YV89 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp27D3YV89 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mmp27D3YV89 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Mmp27D3YV89 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.28■■□□□ 1
Mmp27D3YV89 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp27D3YV89 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp27D3YV89 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp27D3YV89 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.22■□□□□ 0.99
Mmp27D3YV89 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.22■□□□□ 0.99
Mmp27D3YV89 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Mmp27D3YV89 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp27D3YV89 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp27D3YV89 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Mmp27D3YV89 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Mmp27D3YV89 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp27D3YV89 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp27D3YV89 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp27D3YV89 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Mmp27D3YV89 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp27D3YV89 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp27D3YV89 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp27D3YV89 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp27D3YV89 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp27D3YV89 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.15■□□□□ 0.98
Mmp27D3YV89 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Mmp27D3YV89 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.14■□□□□ 0.97
Mmp27D3YV89 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp27D3YV89 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp27D3YV89 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp27D3YV89 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp27D3YV89 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp27D3YV89 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp27D3YV89 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp27D3YV89 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp27D3YV89 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp27D3YV89 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp27D3YV89 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp27D3YV89 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp27D3YV89 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp27D3YV89 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp27D3YV89 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Mmp27D3YV89 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Mmp27D3YV89 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp27D3YV89 AC166822.3-201ENSMUST00000227394 661 ntBASIC21■□□□□ 0.95
Mmp27D3YV89 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp27D3YV89 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp27D3YV89 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 485 ms