Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm12887B1AVM1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm12887B1AVM1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Gm12887B1AVM1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gm12887B1AVM1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm12887B1AVM1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm12887B1AVM1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm12887B1AVM1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm12887B1AVM1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm12887B1AVM1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm12887B1AVM1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Gm12887B1AVM1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm12887B1AVM1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm12887B1AVM1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm12887B1AVM1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm12887B1AVM1 Gm25238-201ENSMUST00000174914 89 ntBASIC20.84■□□□□ 0.93
Gm12887B1AVM1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm12887B1AVM1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm12887B1AVM1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm12887B1AVM1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm12887B1AVM1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
Gm12887B1AVM1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Gm12887B1AVM1 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.81■□□□□ 0.92
Gm12887B1AVM1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm12887B1AVM1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm12887B1AVM1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm12887B1AVM1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm12887B1AVM1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Gm12887B1AVM1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm12887B1AVM1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm12887B1AVM1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm12887B1AVM1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm12887B1AVM1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm12887B1AVM1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Gm12887B1AVM1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm12887B1AVM1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
Gm12887B1AVM1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm12887B1AVM1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm12887B1AVM1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm12887B1AVM1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm12887B1AVM1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm12887B1AVM1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm12887B1AVM1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm12887B1AVM1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Gm12887B1AVM1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.7■□□□□ 0.9
Gm12887B1AVM1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm12887B1AVM1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm12887B1AVM1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm12887B1AVM1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm12887B1AVM1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm12887B1AVM1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm12887B1AVM1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm12887B1AVM1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm12887B1AVM1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Gm12887B1AVM1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.62■□□□□ 0.89
Gm12887B1AVM1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.61■□□□□ 0.89
Gm12887B1AVM1 Amer2-203ENSMUST00000225247 2662 ntBASIC20.61■□□□□ 0.89
Gm12887B1AVM1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm12887B1AVM1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm12887B1AVM1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm12887B1AVM1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm12887B1AVM1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.58■□□□□ 0.89
Gm12887B1AVM1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm12887B1AVM1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm12887B1AVM1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm12887B1AVM1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm12887B1AVM1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm12887B1AVM1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm12887B1AVM1 Mipep-204ENSMUST00000225043 1548 ntBASIC20.54■□□□□ 0.88
Gm12887B1AVM1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Gm12887B1AVM1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm12887B1AVM1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Gm12887B1AVM1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Gm12887B1AVM1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm12887B1AVM1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm12887B1AVM1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm12887B1AVM1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm12887B1AVM1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Gm12887B1AVM1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm12887B1AVM1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm12887B1AVM1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm12887B1AVM1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Gm12887B1AVM1 Rab21-202ENSMUST00000218831 843 ntBASIC20.48■□□□□ 0.87
Gm12887B1AVM1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm12887B1AVM1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Gm12887B1AVM1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Gm12887B1AVM1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12887B1AVM1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12887B1AVM1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12887B1AVM1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Gm12887B1AVM1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Gm12887B1AVM1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm12887B1AVM1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.42■□□□□ 0.86
Gm12887B1AVM1 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.41■□□□□ 0.86
Gm12887B1AVM1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm12887B1AVM1 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.39■□□□□ 0.85
Gm12887B1AVM1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Gm12887B1AVM1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm12887B1AVM1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm12887B1AVM1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms