Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.16■□□□□ 0.98
Col6a5A6H584 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col6a5A6H584 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col6a5A6H584 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.14■□□□□ 0.98
Col6a5A6H584 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.11■□□□□ 0.97
Col6a5A6H584 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col6a5A6H584 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.1■□□□□ 0.97
Col6a5A6H584 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col6a5A6H584 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col6a5A6H584 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Col6a5A6H584 Gm8503-201ENSMUST00000118131 455 ntBASIC21.09■□□□□ 0.97
Col6a5A6H584 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.08■□□□□ 0.97
Col6a5A6H584 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.08■□□□□ 0.97
Col6a5A6H584 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Col6a5A6H584 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col6a5A6H584 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col6a5A6H584 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col6a5A6H584 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col6a5A6H584 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Col6a5A6H584 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.01■□□□□ 0.95
Col6a5A6H584 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col6a5A6H584 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col6a5A6H584 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col6a5A6H584 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.98■□□□□ 0.95
Col6a5A6H584 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col6a5A6H584 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col6a5A6H584 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.94■□□□□ 0.94
Col6a5A6H584 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.93■□□□□ 0.94
Col6a5A6H584 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col6a5A6H584 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col6a5A6H584 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.91■□□□□ 0.94
Col6a5A6H584 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.88■□□□□ 0.93
Col6a5A6H584 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.88■□□□□ 0.93
Col6a5A6H584 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col6a5A6H584 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col6a5A6H584 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Col6a5A6H584 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col6a5A6H584 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.84■□□□□ 0.93
Col6a5A6H584 Gm24970-201ENSMUST00000175582 82 ntBASIC20.82■□□□□ 0.92
Col6a5A6H584 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col6a5A6H584 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.8■□□□□ 0.92
Col6a5A6H584 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col6a5A6H584 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col6a5A6H584 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.79■□□□□ 0.92
Col6a5A6H584 Gm6821-201ENSMUST00000107540 542 ntBASIC20.78■□□□□ 0.92
Col6a5A6H584 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col6a5A6H584 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Col6a5A6H584 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col6a5A6H584 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col6a5A6H584 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.7■□□□□ 0.9
Col6a5A6H584 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col6a5A6H584 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col6a5A6H584 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col6a5A6H584 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.66■□□□□ 0.9
Col6a5A6H584 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col6a5A6H584 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.63■□□□□ 0.89
Col6a5A6H584 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col6a5A6H584 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col6a5A6H584 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col6a5A6H584 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col6a5A6H584 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col6a5A6H584 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col6a5A6H584 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col6a5A6H584 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.57■□□□□ 0.88
Col6a5A6H584 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col6a5A6H584 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Col6a5A6H584 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Col6a5A6H584 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col6a5A6H584 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col6a5A6H584 Gm7432-201ENSMUST00000210343 879 ntBASIC20.54■□□□□ 0.88
Col6a5A6H584 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col6a5A6H584 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.51■□□□□ 0.87
Col6a5A6H584 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col6a5A6H584 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col6a5A6H584 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col6a5A6H584 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col6a5A6H584 Mir6538-201ENSMUST00000183713 110 ntBASIC20.49■□□□□ 0.87
Col6a5A6H584 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.48■□□□□ 0.87
Col6a5A6H584 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.46■□□□□ 0.87
Col6a5A6H584 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.45■□□□□ 0.86
Col6a5A6H584 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Col6a5A6H584 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Col6a5A6H584 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col6a5A6H584 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.43■□□□□ 0.86
Col6a5A6H584 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.43■□□□□ 0.86
Col6a5A6H584 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col6a5A6H584 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Col6a5A6H584 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col6a5A6H584 Gm15039-201ENSMUST00000118914 875 ntBASIC20.39■□□□□ 0.85
Col6a5A6H584 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Col6a5A6H584 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.38■□□□□ 0.85
Col6a5A6H584 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col6a5A6H584 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.37■□□□□ 0.85
Col6a5A6H584 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col6a5A6H584 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col6a5A6H584 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col6a5A6H584 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
Col6a5A6H584 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.33■□□□□ 0.85
Col6a5A6H584 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col6a5A6H584 Gm11175-201ENSMUST00000116172 543 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms