Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Smim17A0A504 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smim17A0A504 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smim17A0A504 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.53■■□□□ 1.36
Smim17A0A504 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Smim17A0A504 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Smim17A0A504 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
Smim17A0A504 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Smim17A0A504 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Smim17A0A504 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.5■■□□□ 1.35
Smim17A0A504 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Smim17A0A504 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Smim17A0A504 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Smim17A0A504 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Smim17A0A504 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Smim17A0A504 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.44■■□□□ 1.34
Smim17A0A504 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Smim17A0A504 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Smim17A0A504 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Smim17A0A504 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Smim17A0A504 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Smim17A0A504 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Smim17A0A504 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Smim17A0A504 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.37■■□□□ 1.33
Smim17A0A504 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smim17A0A504 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Smim17A0A504 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smim17A0A504 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smim17A0A504 Amer2-203ENSMUST00000225247 2662 ntBASIC23.35■■□□□ 1.33
Smim17A0A504 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.35■■□□□ 1.33
Smim17A0A504 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Smim17A0A504 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smim17A0A504 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smim17A0A504 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smim17A0A504 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smim17A0A504 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smim17A0A504 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Smim17A0A504 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Smim17A0A504 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Smim17A0A504 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smim17A0A504 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Smim17A0A504 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.21■■□□□ 1.31
Smim17A0A504 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Smim17A0A504 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Smim17A0A504 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smim17A0A504 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smim17A0A504 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smim17A0A504 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.18■■□□□ 1.3
Smim17A0A504 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Smim17A0A504 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smim17A0A504 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
Smim17A0A504 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smim17A0A504 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Smim17A0A504 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Smim17A0A504 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smim17A0A504 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.14■■□□□ 1.3
Smim17A0A504 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smim17A0A504 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Smim17A0A504 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smim17A0A504 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smim17A0A504 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.1■■□□□ 1.29
Smim17A0A504 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Smim17A0A504 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Smim17A0A504 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smim17A0A504 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smim17A0A504 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smim17A0A504 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Smim17A0A504 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Smim17A0A504 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Smim17A0A504 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Smim17A0A504 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smim17A0A504 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Smim17A0A504 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Smim17A0A504 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smim17A0A504 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smim17A0A504 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smim17A0A504 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smim17A0A504 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.98■■□□□ 1.27
Smim17A0A504 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.96■■□□□ 1.27
Smim17A0A504 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Smim17A0A504 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Smim17A0A504 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.95■■□□□ 1.26
Smim17A0A504 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Smim17A0A504 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Smim17A0A504 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Smim17A0A504 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Smim17A0A504 Gm27325-201ENSMUST00000175467 74 ntBASIC22.93■■□□□ 1.26
Smim17A0A504 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smim17A0A504 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smim17A0A504 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Smim17A0A504 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Smim17A0A504 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Smim17A0A504 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
Smim17A0A504 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.88■■□□□ 1.25
Smim17A0A504 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Smim17A0A504 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Smim17A0A504 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Smim17A0A504 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Smim17A0A504 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smim17A0A504 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms