Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv3-3A0A140T8Q0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Igkv3-3A0A140T8Q0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv3-3A0A140T8Q0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Igkv3-3A0A140T8Q0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC15.65■□□□□ 0.1
Igkv3-3A0A140T8Q0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv3-3A0A140T8Q0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv3-3A0A140T8Q0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC15.65■□□□□ 0.1
Igkv3-3A0A140T8Q0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv3-3A0A140T8Q0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv3-3A0A140T8Q0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv3-3A0A140T8Q0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv3-3A0A140T8Q0 Zxda-201ENSMUST00000117281 2621 ntBASIC15.62■□□□□ 0.09
Igkv3-3A0A140T8Q0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv3-3A0A140T8Q0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Igkv3-3A0A140T8Q0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv3-3A0A140T8Q0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv3-3A0A140T8Q0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv3-3A0A140T8Q0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Igkv3-3A0A140T8Q0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv3-3A0A140T8Q0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv3-3A0A140T8Q0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv3-3A0A140T8Q0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv3-3A0A140T8Q0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv3-3A0A140T8Q0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv3-3A0A140T8Q0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv3-3A0A140T8Q0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Igkv3-3A0A140T8Q0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igkv3-3A0A140T8Q0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igkv3-3A0A140T8Q0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv3-3A0A140T8Q0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv3-3A0A140T8Q0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv3-3A0A140T8Q0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC15.5■□□□□ 0.07
Igkv3-3A0A140T8Q0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv3-3A0A140T8Q0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Igkv3-3A0A140T8Q0 Gm27325-201ENSMUST00000175467 74 ntBASIC15.48■□□□□ 0.07
Igkv3-3A0A140T8Q0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv3-3A0A140T8Q0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv3-3A0A140T8Q0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Igkv3-3A0A140T8Q0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Igkv3-3A0A140T8Q0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Igkv3-3A0A140T8Q0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Igkv3-3A0A140T8Q0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Igkv3-3A0A140T8Q0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv3-3A0A140T8Q0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC15.43■□□□□ 0.06
Igkv3-3A0A140T8Q0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC15.43■□□□□ 0.06
Igkv3-3A0A140T8Q0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Igkv3-3A0A140T8Q0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Igkv3-3A0A140T8Q0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC15.41■□□□□ 0.06
Igkv3-3A0A140T8Q0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Igkv3-3A0A140T8Q0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv3-3A0A140T8Q0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv3-3A0A140T8Q0 Gm2415-204ENSMUST00000190235 2004 ntBASIC15.39■□□□□ 0.05
Igkv3-3A0A140T8Q0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.38■□□□□ 0.05
Igkv3-3A0A140T8Q0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv3-3A0A140T8Q0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv3-3A0A140T8Q0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Igkv3-3A0A140T8Q0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv3-3A0A140T8Q0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Igkv3-3A0A140T8Q0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.35■□□□□ 0.05
Igkv3-3A0A140T8Q0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv3-3A0A140T8Q0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Igkv3-3A0A140T8Q0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Igkv3-3A0A140T8Q0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC15.33■□□□□ 0.04
Igkv3-3A0A140T8Q0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Igkv3-3A0A140T8Q0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv3-3A0A140T8Q0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv3-3A0A140T8Q0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv3-3A0A140T8Q0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv3-3A0A140T8Q0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv3-3A0A140T8Q0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv3-3A0A140T8Q0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv3-3A0A140T8Q0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv3-3A0A140T8Q0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv3-3A0A140T8Q0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv3-3A0A140T8Q0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC15.29■□□□□ 0.04
Igkv3-3A0A140T8Q0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv3-3A0A140T8Q0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Igkv3-3A0A140T8Q0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv3-3A0A140T8Q0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Igkv3-3A0A140T8Q0 Gm6658-202ENSMUST00000209493 1885 ntBASIC15.27■□□□□ 0.04
Igkv3-3A0A140T8Q0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Igkv3-3A0A140T8Q0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Igkv3-3A0A140T8Q0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv3-3A0A140T8Q0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv3-3A0A140T8Q0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv3-3A0A140T8Q0 Gm25238-201ENSMUST00000174914 89 ntBASIC15.24■□□□□ 0.03
Igkv3-3A0A140T8Q0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv3-3A0A140T8Q0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv3-3A0A140T8Q0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv3-3A0A140T8Q0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv3-3A0A140T8Q0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC15.22■□□□□ 0.03
Igkv3-3A0A140T8Q0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv3-3A0A140T8Q0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Igkv3-3A0A140T8Q0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv3-3A0A140T8Q0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv3-3A0A140T8Q0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-3A0A140T8Q0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Igkv3-3A0A140T8Q0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-3A0A140T8Q0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms