Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9d-4A0A0G2JG37 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9d-4A0A0G2JG37 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9d-4A0A0G2JG37 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9d-4A0A0G2JG37 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9d-4A0A0G2JG37 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav9d-4A0A0G2JG37 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9d-4A0A0G2JG37 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9d-4A0A0G2JG37 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9d-4A0A0G2JG37 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9d-4A0A0G2JG37 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav9d-4A0A0G2JG37 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9d-4A0A0G2JG37 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9d-4A0A0G2JG37 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9d-4A0A0G2JG37 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav9d-4A0A0G2JG37 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9d-4A0A0G2JG37 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Trav9d-4A0A0G2JG37 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9d-4A0A0G2JG37 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.48■□□□□ 0.39
Trav9d-4A0A0G2JG37 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9d-4A0A0G2JG37 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav9d-4A0A0G2JG37 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9d-4A0A0G2JG37 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-4A0A0G2JG37 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-4A0A0G2JG37 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-4A0A0G2JG37 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-4A0A0G2JG37 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.44■□□□□ 0.38
Trav9d-4A0A0G2JG37 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-4A0A0G2JG37 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-4A0A0G2JG37 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav9d-4A0A0G2JG37 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav9d-4A0A0G2JG37 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav9d-4A0A0G2JG37 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav9d-4A0A0G2JG37 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav9d-4A0A0G2JG37 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav9d-4A0A0G2JG37 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav9d-4A0A0G2JG37 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9d-4A0A0G2JG37 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav9d-4A0A0G2JG37 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.34■□□□□ 0.37
Trav9d-4A0A0G2JG37 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav9d-4A0A0G2JG37 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9d-4A0A0G2JG37 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trav9d-4A0A0G2JG37 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9d-4A0A0G2JG37 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav9d-4A0A0G2JG37 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-4A0A0G2JG37 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-4A0A0G2JG37 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trav9d-4A0A0G2JG37 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9d-4A0A0G2JG37 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav9d-4A0A0G2JG37 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9d-4A0A0G2JG37 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9d-4A0A0G2JG37 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-4A0A0G2JG37 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-4A0A0G2JG37 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-4A0A0G2JG37 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-4A0A0G2JG37 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-4A0A0G2JG37 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav9d-4A0A0G2JG37 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav9d-4A0A0G2JG37 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav9d-4A0A0G2JG37 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.27■□□□□ 0.35
Trav9d-4A0A0G2JG37 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9d-4A0A0G2JG37 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9d-4A0A0G2JG37 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav9d-4A0A0G2JG37 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9d-4A0A0G2JG37 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trav9d-4A0A0G2JG37 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9d-4A0A0G2JG37 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9d-4A0A0G2JG37 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Trav9d-4A0A0G2JG37 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9d-4A0A0G2JG37 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav9d-4A0A0G2JG37 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.24■□□□□ 0.35
Trav9d-4A0A0G2JG37 Rab21-202ENSMUST00000218831 843 ntBASIC17.24■□□□□ 0.35
Trav9d-4A0A0G2JG37 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.24■□□□□ 0.35
Trav9d-4A0A0G2JG37 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9d-4A0A0G2JG37 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav9d-4A0A0G2JG37 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9d-4A0A0G2JG37 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9d-4A0A0G2JG37 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9d-4A0A0G2JG37 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-4A0A0G2JG37 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-4A0A0G2JG37 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-4A0A0G2JG37 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.34
Trav9d-4A0A0G2JG37 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9d-4A0A0G2JG37 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav9d-4A0A0G2JG37 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9d-4A0A0G2JG37 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9d-4A0A0G2JG37 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9d-4A0A0G2JG37 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9d-4A0A0G2JG37 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-4A0A0G2JG37 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-4A0A0G2JG37 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-4A0A0G2JG37 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav9d-4A0A0G2JG37 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-4A0A0G2JG37 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-4A0A0G2JG37 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9d-4A0A0G2JG37 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9d-4A0A0G2JG37 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9d-4A0A0G2JG37 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav9d-4A0A0G2JG37 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9d-4A0A0G2JG37 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms