Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trav23A0A0G2JG17 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav23A0A0G2JG17 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav23A0A0G2JG17 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav23A0A0G2JG17 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav23A0A0G2JG17 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trav23A0A0G2JG17 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.08■□□□□ 0.97
Trav23A0A0G2JG17 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trav23A0A0G2JG17 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trav23A0A0G2JG17 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav23A0A0G2JG17 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav23A0A0G2JG17 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trav23A0A0G2JG17 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav23A0A0G2JG17 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav23A0A0G2JG17 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trav23A0A0G2JG17 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav23A0A0G2JG17 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav23A0A0G2JG17 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trav23A0A0G2JG17 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trav23A0A0G2JG17 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.97■□□□□ 0.95
Trav23A0A0G2JG17 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav23A0A0G2JG17 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trav23A0A0G2JG17 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav23A0A0G2JG17 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trav23A0A0G2JG17 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.92■□□□□ 0.94
Trav23A0A0G2JG17 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trav23A0A0G2JG17 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav23A0A0G2JG17 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav23A0A0G2JG17 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav23A0A0G2JG17 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trav23A0A0G2JG17 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trav23A0A0G2JG17 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav23A0A0G2JG17 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav23A0A0G2JG17 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trav23A0A0G2JG17 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav23A0A0G2JG17 Peli2-204ENSMUST00000226513 1320 ntBASIC20.86■□□□□ 0.93
Trav23A0A0G2JG17 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.85■□□□□ 0.93
Trav23A0A0G2JG17 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav23A0A0G2JG17 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav23A0A0G2JG17 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trav23A0A0G2JG17 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav23A0A0G2JG17 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav23A0A0G2JG17 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trav23A0A0G2JG17 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav23A0A0G2JG17 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trav23A0A0G2JG17 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trav23A0A0G2JG17 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav23A0A0G2JG17 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.79■□□□□ 0.92
Trav23A0A0G2JG17 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav23A0A0G2JG17 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav23A0A0G2JG17 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Trav23A0A0G2JG17 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav23A0A0G2JG17 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav23A0A0G2JG17 Gm16148-201ENSMUST00000119653 893 ntBASIC20.76■□□□□ 0.91
Trav23A0A0G2JG17 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trav23A0A0G2JG17 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav23A0A0G2JG17 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav23A0A0G2JG17 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav23A0A0G2JG17 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav23A0A0G2JG17 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav23A0A0G2JG17 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav23A0A0G2JG17 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav23A0A0G2JG17 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav23A0A0G2JG17 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Trav23A0A0G2JG17 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav23A0A0G2JG17 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.65■□□□□ 0.9
Trav23A0A0G2JG17 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav23A0A0G2JG17 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav23A0A0G2JG17 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav23A0A0G2JG17 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav23A0A0G2JG17 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav23A0A0G2JG17 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav23A0A0G2JG17 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trav23A0A0G2JG17 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav23A0A0G2JG17 Zfp131-205ENSMUST00000223812 663 ntBASIC20.6■□□□□ 0.89
Trav23A0A0G2JG17 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.59■□□□□ 0.89
Trav23A0A0G2JG17 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav23A0A0G2JG17 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.58■□□□□ 0.89
Trav23A0A0G2JG17 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav23A0A0G2JG17 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav23A0A0G2JG17 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav23A0A0G2JG17 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trav23A0A0G2JG17 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.56■□□□□ 0.88
Trav23A0A0G2JG17 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Trav23A0A0G2JG17 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trav23A0A0G2JG17 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.53■□□□□ 0.88
Trav23A0A0G2JG17 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav23A0A0G2JG17 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.5■□□□□ 0.87
Trav23A0A0G2JG17 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav23A0A0G2JG17 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav23A0A0G2JG17 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.49■□□□□ 0.87
Trav23A0A0G2JG17 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav23A0A0G2JG17 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav23A0A0G2JG17 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav23A0A0G2JG17 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.47■□□□□ 0.87
Trav23A0A0G2JG17 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav23A0A0G2JG17 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav23A0A0G2JG17 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav23A0A0G2JG17 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav23A0A0G2JG17 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms