Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.23■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.23■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Gm27322-201ENSMUST00000184007 104 ntBASIC18.21■□□□□ 0.51
Igkv4-53A0A0G2JFC6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Igkv4-53A0A0G2JFC6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv4-53A0A0G2JFC6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Igkv4-53A0A0G2JFC6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Igkv4-53A0A0G2JFC6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv4-53A0A0G2JFC6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv4-53A0A0G2JFC6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.16■□□□□ 0.5
Igkv4-53A0A0G2JFC6 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.14■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.13■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Gm26115-201ENSMUST00000175605 87 ntBASIC18.12■□□□□ 0.49
Igkv4-53A0A0G2JFC6 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.12■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Gm8109-201ENSMUST00000194076 746 ntBASIC18.1■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv4-53A0A0G2JFC6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Igkv4-53A0A0G2JFC6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv4-53A0A0G2JFC6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv4-53A0A0G2JFC6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Igkv4-53A0A0G2JFC6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv4-53A0A0G2JFC6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv4-53A0A0G2JFC6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv4-53A0A0G2JFC6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv4-53A0A0G2JFC6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv4-53A0A0G2JFC6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv4-53A0A0G2JFC6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv4-53A0A0G2JFC6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv4-53A0A0G2JFC6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv4-53A0A0G2JFC6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv4-53A0A0G2JFC6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv4-53A0A0G2JFC6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv4-53A0A0G2JFC6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv4-53A0A0G2JFC6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv4-53A0A0G2JFC6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv4-53A0A0G2JFC6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv4-53A0A0G2JFC6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.91■□□□□ 0.46
Igkv4-53A0A0G2JFC6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Igkv4-53A0A0G2JFC6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Igkv4-53A0A0G2JFC6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv4-53A0A0G2JFC6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv4-53A0A0G2JFC6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv4-53A0A0G2JFC6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv4-53A0A0G2JFC6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv4-53A0A0G2JFC6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv4-53A0A0G2JFC6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv4-53A0A0G2JFC6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.86■□□□□ 0.45
Igkv4-53A0A0G2JFC6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv4-53A0A0G2JFC6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv4-53A0A0G2JFC6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv4-53A0A0G2JFC6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.83■□□□□ 0.45
Igkv4-53A0A0G2JFC6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv4-53A0A0G2JFC6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.78■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv4-53A0A0G2JFC6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.75■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.74■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.73■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Igkv4-53A0A0G2JFC6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms