Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv6-4A0A0A6YX19 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.58■□□□□ 0.89
Ighv6-4A0A0A6YX19 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv6-4A0A0A6YX19 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv6-4A0A0A6YX19 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv6-4A0A0A6YX19 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv6-4A0A0A6YX19 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv6-4A0A0A6YX19 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv6-4A0A0A6YX19 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv6-4A0A0A6YX19 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ighv6-4A0A0A6YX19 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv6-4A0A0A6YX19 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv6-4A0A0A6YX19 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv6-4A0A0A6YX19 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv6-4A0A0A6YX19 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv6-4A0A0A6YX19 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv6-4A0A0A6YX19 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv6-4A0A0A6YX19 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ighv6-4A0A0A6YX19 Amer2-203ENSMUST00000225247 2662 ntBASIC20.48■□□□□ 0.87
Ighv6-4A0A0A6YX19 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv6-4A0A0A6YX19 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv6-4A0A0A6YX19 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv6-4A0A0A6YX19 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv6-4A0A0A6YX19 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.45■□□□□ 0.86
Ighv6-4A0A0A6YX19 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv6-4A0A0A6YX19 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv6-4A0A0A6YX19 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv6-4A0A0A6YX19 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv6-4A0A0A6YX19 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ighv6-4A0A0A6YX19 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ighv6-4A0A0A6YX19 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.86
Ighv6-4A0A0A6YX19 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.39■□□□□ 0.86
Ighv6-4A0A0A6YX19 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv6-4A0A0A6YX19 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv6-4A0A0A6YX19 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv6-4A0A0A6YX19 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ighv6-4A0A0A6YX19 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ighv6-4A0A0A6YX19 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ighv6-4A0A0A6YX19 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv6-4A0A0A6YX19 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.34■□□□□ 0.85
Ighv6-4A0A0A6YX19 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv6-4A0A0A6YX19 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.33■□□□□ 0.85
Ighv6-4A0A0A6YX19 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ighv6-4A0A0A6YX19 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ighv6-4A0A0A6YX19 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ighv6-4A0A0A6YX19 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ighv6-4A0A0A6YX19 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ighv6-4A0A0A6YX19 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv6-4A0A0A6YX19 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv6-4A0A0A6YX19 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ighv6-4A0A0A6YX19 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Ighv6-4A0A0A6YX19 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv6-4A0A0A6YX19 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv6-4A0A0A6YX19 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv6-4A0A0A6YX19 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv6-4A0A0A6YX19 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.25■□□□□ 0.83
Ighv6-4A0A0A6YX19 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv6-4A0A0A6YX19 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv6-4A0A0A6YX19 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv6-4A0A0A6YX19 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv6-4A0A0A6YX19 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv6-4A0A0A6YX19 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv6-4A0A0A6YX19 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv6-4A0A0A6YX19 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.2■□□□□ 0.82
Ighv6-4A0A0A6YX19 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ighv6-4A0A0A6YX19 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv6-4A0A0A6YX19 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv6-4A0A0A6YX19 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv6-4A0A0A6YX19 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.15■□□□□ 0.82
Ighv6-4A0A0A6YX19 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv6-4A0A0A6YX19 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ighv6-4A0A0A6YX19 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv6-4A0A0A6YX19 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.14■□□□□ 0.81
Ighv6-4A0A0A6YX19 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv6-4A0A0A6YX19 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv6-4A0A0A6YX19 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv6-4A0A0A6YX19 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv6-4A0A0A6YX19 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv6-4A0A0A6YX19 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.11■□□□□ 0.81
Ighv6-4A0A0A6YX19 Gm27325-201ENSMUST00000175467 74 ntBASIC20.11■□□□□ 0.81
Ighv6-4A0A0A6YX19 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv6-4A0A0A6YX19 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv6-4A0A0A6YX19 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv6-4A0A0A6YX19 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv6-4A0A0A6YX19 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ighv6-4A0A0A6YX19 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.09■□□□□ 0.81
Ighv6-4A0A0A6YX19 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv6-4A0A0A6YX19 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv6-4A0A0A6YX19 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv6-4A0A0A6YX19 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ighv6-4A0A0A6YX19 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ighv6-4A0A0A6YX19 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.07■□□□□ 0.8
Ighv6-4A0A0A6YX19 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv6-4A0A0A6YX19 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv6-4A0A0A6YX19 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ighv6-4A0A0A6YX19 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv6-4A0A0A6YX19 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv6-4A0A0A6YX19 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv6-4A0A0A6YX19 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20■□□□□ 0.79
Ighv6-4A0A0A6YX19 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms