Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gm28778A0A087WSK7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm28778A0A087WSK7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm28778A0A087WSK7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm28778A0A087WSK7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Gm28778A0A087WSK7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm28778A0A087WSK7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm28778A0A087WSK7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Gm28778A0A087WSK7 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.38■■□□□ 1.01
Gm28778A0A087WSK7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.37■■□□□ 1.01
Gm28778A0A087WSK7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm28778A0A087WSK7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm28778A0A087WSK7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28778A0A087WSK7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm28778A0A087WSK7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm28778A0A087WSK7 Gm24804-201ENSMUST00000174982 85 ntBASIC21.28■■□□□ 1
Gm28778A0A087WSK7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm28778A0A087WSK7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28778A0A087WSK7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28778A0A087WSK7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm28778A0A087WSK7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Gm28778A0A087WSK7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28778A0A087WSK7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm28778A0A087WSK7 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.24■□□□□ 0.99
Gm28778A0A087WSK7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Gm28778A0A087WSK7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28778A0A087WSK7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28778A0A087WSK7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28778A0A087WSK7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28778A0A087WSK7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28778A0A087WSK7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28778A0A087WSK7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28778A0A087WSK7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28778A0A087WSK7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28778A0A087WSK7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28778A0A087WSK7 Peli2-204ENSMUST00000226513 1320 ntBASIC21.19■□□□□ 0.98
Gm28778A0A087WSK7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm28778A0A087WSK7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28778A0A087WSK7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Gm28778A0A087WSK7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28778A0A087WSK7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.1■□□□□ 0.97
Gm28778A0A087WSK7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.07■□□□□ 0.96
Gm28778A0A087WSK7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28778A0A087WSK7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm28778A0A087WSK7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm28778A0A087WSK7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Gm28778A0A087WSK7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gm28778A0A087WSK7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Gm28778A0A087WSK7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28778A0A087WSK7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28778A0A087WSK7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28778A0A087WSK7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm28778A0A087WSK7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.03■□□□□ 0.96
Gm28778A0A087WSK7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Gm28778A0A087WSK7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28778A0A087WSK7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28778A0A087WSK7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28778A0A087WSK7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28778A0A087WSK7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28778A0A087WSK7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Gm28778A0A087WSK7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28778A0A087WSK7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28778A0A087WSK7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28778A0A087WSK7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28778A0A087WSK7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.95■□□□□ 0.95
Gm28778A0A087WSK7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28778A0A087WSK7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Gm28778A0A087WSK7 Gm16148-201ENSMUST00000119653 893 ntBASIC20.93■□□□□ 0.94
Gm28778A0A087WSK7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Gm28778A0A087WSK7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28778A0A087WSK7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28778A0A087WSK7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28778A0A087WSK7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Gm28778A0A087WSK7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28778A0A087WSK7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Gm28778A0A087WSK7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Gm28778A0A087WSK7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.89■□□□□ 0.93
Gm28778A0A087WSK7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28778A0A087WSK7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28778A0A087WSK7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28778A0A087WSK7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.86■□□□□ 0.93
Gm28778A0A087WSK7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28778A0A087WSK7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28778A0A087WSK7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28778A0A087WSK7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.85■□□□□ 0.93
Gm28778A0A087WSK7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28778A0A087WSK7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28778A0A087WSK7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28778A0A087WSK7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28778A0A087WSK7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28778A0A087WSK7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Gm28778A0A087WSK7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28778A0A087WSK7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28778A0A087WSK7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Gm28778A0A087WSK7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28778A0A087WSK7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28778A0A087WSK7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm28778A0A087WSK7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm28778A0A087WSK7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Gm28778A0A087WSK7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms