Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gm28778A0A087WSK7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm28778A0A087WSK7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm28778A0A087WSK7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm28778A0A087WSK7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Gm28778A0A087WSK7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm28778A0A087WSK7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm28778A0A087WSK7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Gm28778A0A087WSK7 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.38■■□□□ 1.01
Gm28778A0A087WSK7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.37■■□□□ 1.01
Gm28778A0A087WSK7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm28778A0A087WSK7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm28778A0A087WSK7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28778A0A087WSK7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm28778A0A087WSK7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm28778A0A087WSK7 Gm24804-201ENSMUST00000174982 85 ntBASIC21.28■■□□□ 1
Gm28778A0A087WSK7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm28778A0A087WSK7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28778A0A087WSK7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28778A0A087WSK7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm28778A0A087WSK7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Gm28778A0A087WSK7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28778A0A087WSK7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm28778A0A087WSK7 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.24■□□□□ 0.99
Gm28778A0A087WSK7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Gm28778A0A087WSK7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28778A0A087WSK7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28778A0A087WSK7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28778A0A087WSK7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28778A0A087WSK7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28778A0A087WSK7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28778A0A087WSK7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28778A0A087WSK7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28778A0A087WSK7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28778A0A087WSK7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28778A0A087WSK7 Peli2-204ENSMUST00000226513 1320 ntBASIC21.19■□□□□ 0.98
Gm28778A0A087WSK7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm28778A0A087WSK7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28778A0A087WSK7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Gm28778A0A087WSK7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28778A0A087WSK7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.1■□□□□ 0.97
Gm28778A0A087WSK7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.07■□□□□ 0.96
Gm28778A0A087WSK7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28778A0A087WSK7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm28778A0A087WSK7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm28778A0A087WSK7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Gm28778A0A087WSK7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gm28778A0A087WSK7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Gm28778A0A087WSK7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28778A0A087WSK7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28778A0A087WSK7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28778A0A087WSK7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm28778A0A087WSK7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.03■□□□□ 0.96
Gm28778A0A087WSK7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Gm28778A0A087WSK7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28778A0A087WSK7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28778A0A087WSK7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28778A0A087WSK7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28778A0A087WSK7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm28778A0A087WSK7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Gm28778A0A087WSK7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm28778A0A087WSK7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28778A0A087WSK7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28778A0A087WSK7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm28778A0A087WSK7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.95■□□□□ 0.95
Gm28778A0A087WSK7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm28778A0A087WSK7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Gm28778A0A087WSK7 Gm16148-201ENSMUST00000119653 893 ntBASIC20.93■□□□□ 0.94
Gm28778A0A087WSK7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Gm28778A0A087WSK7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28778A0A087WSK7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28778A0A087WSK7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28778A0A087WSK7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Gm28778A0A087WSK7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28778A0A087WSK7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Gm28778A0A087WSK7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Gm28778A0A087WSK7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.89■□□□□ 0.93
Gm28778A0A087WSK7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28778A0A087WSK7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28778A0A087WSK7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28778A0A087WSK7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.86■□□□□ 0.93
Gm28778A0A087WSK7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28778A0A087WSK7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28778A0A087WSK7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28778A0A087WSK7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.85■□□□□ 0.93
Gm28778A0A087WSK7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28778A0A087WSK7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28778A0A087WSK7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28778A0A087WSK7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28778A0A087WSK7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28778A0A087WSK7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Gm28778A0A087WSK7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28778A0A087WSK7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28778A0A087WSK7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Gm28778A0A087WSK7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28778A0A087WSK7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28778A0A087WSK7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm28778A0A087WSK7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm28778A0A087WSK7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Gm28778A0A087WSK7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms