Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.11■□□□□ 0.65
Trav6n-6A0A075B6B2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6n-6A0A075B6B2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.1■□□□□ 0.65
Trav6n-6A0A075B6B2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6n-6A0A075B6B2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav6n-6A0A075B6B2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6n-6A0A075B6B2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6n-6A0A075B6B2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Trav6n-6A0A075B6B2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6n-6A0A075B6B2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trav6n-6A0A075B6B2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6n-6A0A075B6B2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav6n-6A0A075B6B2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Trav6n-6A0A075B6B2 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.01■□□□□ 0.63
Trav6n-6A0A075B6B2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav6n-6A0A075B6B2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav6n-6A0A075B6B2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6n-6A0A075B6B2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.98■□□□□ 0.63
Trav6n-6A0A075B6B2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6n-6A0A075B6B2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6n-6A0A075B6B2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6n-6A0A075B6B2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav6n-6A0A075B6B2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.97■□□□□ 0.63
Trav6n-6A0A075B6B2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
Trav6n-6A0A075B6B2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav6n-6A0A075B6B2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav6n-6A0A075B6B2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6n-6A0A075B6B2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-6A0A075B6B2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-6A0A075B6B2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-6A0A075B6B2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-6A0A075B6B2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-6A0A075B6B2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6n-6A0A075B6B2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6n-6A0A075B6B2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6n-6A0A075B6B2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6n-6A0A075B6B2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6n-6A0A075B6B2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trav6n-6A0A075B6B2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6n-6A0A075B6B2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trav6n-6A0A075B6B2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6n-6A0A075B6B2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trav6n-6A0A075B6B2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.88■□□□□ 0.61
Trav6n-6A0A075B6B2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6n-6A0A075B6B2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trav6n-6A0A075B6B2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Trav6n-6A0A075B6B2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav6n-6A0A075B6B2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6n-6A0A075B6B2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6n-6A0A075B6B2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6n-6A0A075B6B2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6n-6A0A075B6B2 Gm26115-201ENSMUST00000175605 87 ntBASIC18.85■□□□□ 0.61
Trav6n-6A0A075B6B2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6n-6A0A075B6B2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6n-6A0A075B6B2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6n-6A0A075B6B2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trav6n-6A0A075B6B2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6n-6A0A075B6B2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6n-6A0A075B6B2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6n-6A0A075B6B2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6n-6A0A075B6B2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6n-6A0A075B6B2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6n-6A0A075B6B2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6n-6A0A075B6B2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6n-6A0A075B6B2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6n-6A0A075B6B2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.77■□□□□ 0.59
Trav6n-6A0A075B6B2 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.76■□□□□ 0.59
Trav6n-6A0A075B6B2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6n-6A0A075B6B2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6n-6A0A075B6B2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6n-6A0A075B6B2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6n-6A0A075B6B2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav6n-6A0A075B6B2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6n-6A0A075B6B2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6n-6A0A075B6B2 Gm27322-201ENSMUST00000184007 104 ntBASIC18.73■□□□□ 0.59
Trav6n-6A0A075B6B2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6n-6A0A075B6B2 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.73■□□□□ 0.59
Trav6n-6A0A075B6B2 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.72■□□□□ 0.59
Trav6n-6A0A075B6B2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trav6n-6A0A075B6B2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.72■□□□□ 0.59
Trav6n-6A0A075B6B2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trav6n-6A0A075B6B2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6n-6A0A075B6B2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6n-6A0A075B6B2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Trav6n-6A0A075B6B2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6n-6A0A075B6B2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6n-6A0A075B6B2 Gm8109-201ENSMUST00000194076 746 ntBASIC18.69■□□□□ 0.58
Trav6n-6A0A075B6B2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6n-6A0A075B6B2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6n-6A0A075B6B2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6n-6A0A075B6B2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.66■□□□□ 0.58
Trav6n-6A0A075B6B2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6n-6A0A075B6B2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trav6n-6A0A075B6B2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trav6n-6A0A075B6B2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6n-6A0A075B6B2 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.63■□□□□ 0.57
Trav6n-6A0A075B6B2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Trav6n-6A0A075B6B2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6n-6A0A075B6B2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6n-6A0A075B6B2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms