Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trav17A0A075B655 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav17A0A075B655 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav17A0A075B655 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav17A0A075B655 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trav17A0A075B655 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav17A0A075B655 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav17A0A075B655 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav17A0A075B655 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav17A0A075B655 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav17A0A075B655 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.49■□□□□ 0.87
Trav17A0A075B655 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav17A0A075B655 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav17A0A075B655 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.48■□□□□ 0.87
Trav17A0A075B655 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trav17A0A075B655 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav17A0A075B655 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trav17A0A075B655 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav17A0A075B655 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav17A0A075B655 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trav17A0A075B655 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav17A0A075B655 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.41■□□□□ 0.86
Trav17A0A075B655 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.41■□□□□ 0.86
Trav17A0A075B655 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav17A0A075B655 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav17A0A075B655 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.4■□□□□ 0.86
Trav17A0A075B655 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav17A0A075B655 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.4■□□□□ 0.86
Trav17A0A075B655 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav17A0A075B655 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Trav17A0A075B655 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav17A0A075B655 Mipep-204ENSMUST00000225043 1548 ntBASIC20.38■□□□□ 0.85
Trav17A0A075B655 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav17A0A075B655 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav17A0A075B655 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav17A0A075B655 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav17A0A075B655 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav17A0A075B655 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.34■□□□□ 0.85
Trav17A0A075B655 Zxda-201ENSMUST00000117281 2621 ntBASIC20.34■□□□□ 0.85
Trav17A0A075B655 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav17A0A075B655 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav17A0A075B655 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav17A0A075B655 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav17A0A075B655 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav17A0A075B655 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav17A0A075B655 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.3■□□□□ 0.84
Trav17A0A075B655 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.3■□□□□ 0.84
Trav17A0A075B655 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trav17A0A075B655 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav17A0A075B655 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav17A0A075B655 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav17A0A075B655 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav17A0A075B655 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav17A0A075B655 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav17A0A075B655 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav17A0A075B655 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav17A0A075B655 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav17A0A075B655 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav17A0A075B655 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav17A0A075B655 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trav17A0A075B655 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.23■□□□□ 0.83
Trav17A0A075B655 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav17A0A075B655 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav17A0A075B655 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav17A0A075B655 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trav17A0A075B655 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trav17A0A075B655 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav17A0A075B655 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav17A0A075B655 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav17A0A075B655 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav17A0A075B655 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trav17A0A075B655 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav17A0A075B655 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Trav17A0A075B655 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Trav17A0A075B655 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trav17A0A075B655 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav17A0A075B655 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav17A0A075B655 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
Trav17A0A075B655 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trav17A0A075B655 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav17A0A075B655 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav17A0A075B655 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav17A0A075B655 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav17A0A075B655 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav17A0A075B655 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav17A0A075B655 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav17A0A075B655 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav17A0A075B655 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav17A0A075B655 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav17A0A075B655 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav17A0A075B655 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav17A0A075B655 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav17A0A075B655 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav17A0A075B655 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav17A0A075B655 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav17A0A075B655 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav17A0A075B655 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav17A0A075B655 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Trav17A0A075B655 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.97■□□□□ 0.79
Trav17A0A075B655 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms