Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.23■□□□□ 0.99
Trav15-2-dv6-2A0A075B650 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav15-2-dv6-2A0A075B650 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav15-2-dv6-2A0A075B650 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav15-2-dv6-2A0A075B650 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trav15-2-dv6-2A0A075B650 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.18■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.17■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.17■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav15-2-dv6-2A0A075B650 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trav15-2-dv6-2A0A075B650 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav15-2-dv6-2A0A075B650 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav15-2-dv6-2A0A075B650 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav15-2-dv6-2A0A075B650 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trav15-2-dv6-2A0A075B650 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trav15-2-dv6-2A0A075B650 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.09■□□□□ 0.97
Trav15-2-dv6-2A0A075B650 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Trav15-2-dv6-2A0A075B650 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav15-2-dv6-2A0A075B650 Mipep-204ENSMUST00000225043 1548 ntBASIC21.08■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Zxda-201ENSMUST00000117281 2621 ntBASIC21.08■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.05■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.02■□□□□ 0.96
Trav15-2-dv6-2A0A075B650 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trav15-2-dv6-2A0A075B650 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav15-2-dv6-2A0A075B650 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trav15-2-dv6-2A0A075B650 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav15-2-dv6-2A0A075B650 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav15-2-dv6-2A0A075B650 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav15-2-dv6-2A0A075B650 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav15-2-dv6-2A0A075B650 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.96■□□□□ 0.95
Trav15-2-dv6-2A0A075B650 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.95■□□□□ 0.94
Trav15-2-dv6-2A0A075B650 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav15-2-dv6-2A0A075B650 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav15-2-dv6-2A0A075B650 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav15-2-dv6-2A0A075B650 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav15-2-dv6-2A0A075B650 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav15-2-dv6-2A0A075B650 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav15-2-dv6-2A0A075B650 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
Trav15-2-dv6-2A0A075B650 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trav15-2-dv6-2A0A075B650 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav15-2-dv6-2A0A075B650 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav15-2-dv6-2A0A075B650 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav15-2-dv6-2A0A075B650 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav15-2-dv6-2A0A075B650 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav15-2-dv6-2A0A075B650 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Trav15-2-dv6-2A0A075B650 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav15-2-dv6-2A0A075B650 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav15-2-dv6-2A0A075B650 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trav15-2-dv6-2A0A075B650 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav15-2-dv6-2A0A075B650 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav15-2-dv6-2A0A075B650 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav15-2-dv6-2A0A075B650 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav15-2-dv6-2A0A075B650 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav15-2-dv6-2A0A075B650 Amer2-203ENSMUST00000225247 2662 ntBASIC20.73■□□□□ 0.91
Trav15-2-dv6-2A0A075B650 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav15-2-dv6-2A0A075B650 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trav15-2-dv6-2A0A075B650 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Trav15-2-dv6-2A0A075B650 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav15-2-dv6-2A0A075B650 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav15-2-dv6-2A0A075B650 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav15-2-dv6-2A0A075B650 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav15-2-dv6-2A0A075B650 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav15-2-dv6-2A0A075B650 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trav15-2-dv6-2A0A075B650 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav15-2-dv6-2A0A075B650 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav15-2-dv6-2A0A075B650 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav15-2-dv6-2A0A075B650 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.62■□□□□ 0.89
Trav15-2-dv6-2A0A075B650 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trav15-2-dv6-2A0A075B650 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav15-2-dv6-2A0A075B650 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav15-2-dv6-2A0A075B650 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms