Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13-1A0A075B644 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav13-1A0A075B644 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13-1A0A075B644 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13-1A0A075B644 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13-1A0A075B644 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13-1A0A075B644 Gm16148-201ENSMUST00000119653 893 ntBASIC18.33■□□□□ 0.52
Trav13-1A0A075B644 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trav13-1A0A075B644 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13-1A0A075B644 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13-1A0A075B644 Zfp131-205ENSMUST00000223812 663 ntBASIC18.31■□□□□ 0.52
Trav13-1A0A075B644 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13-1A0A075B644 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13-1A0A075B644 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13-1A0A075B644 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav13-1A0A075B644 Peli2-204ENSMUST00000226513 1320 ntBASIC18.3■□□□□ 0.52
Trav13-1A0A075B644 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trav13-1A0A075B644 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trav13-1A0A075B644 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13-1A0A075B644 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13-1A0A075B644 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13-1A0A075B644 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav13-1A0A075B644 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav13-1A0A075B644 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav13-1A0A075B644 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav13-1A0A075B644 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav13-1A0A075B644 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav13-1A0A075B644 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav13-1A0A075B644 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trav13-1A0A075B644 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav13-1A0A075B644 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13-1A0A075B644 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13-1A0A075B644 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13-1A0A075B644 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.19■□□□□ 0.5
Trav13-1A0A075B644 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13-1A0A075B644 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav13-1A0A075B644 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav13-1A0A075B644 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13-1A0A075B644 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.16■□□□□ 0.5
Trav13-1A0A075B644 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav13-1A0A075B644 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.14■□□□□ 0.49
Trav13-1A0A075B644 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Trav13-1A0A075B644 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav13-1A0A075B644 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13-1A0A075B644 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13-1A0A075B644 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13-1A0A075B644 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trav13-1A0A075B644 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav13-1A0A075B644 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav13-1A0A075B644 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.08■□□□□ 0.48
Trav13-1A0A075B644 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13-1A0A075B644 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13-1A0A075B644 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav13-1A0A075B644 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13-1A0A075B644 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav13-1A0A075B644 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.05■□□□□ 0.48
Trav13-1A0A075B644 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13-1A0A075B644 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13-1A0A075B644 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13-1A0A075B644 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13-1A0A075B644 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav13-1A0A075B644 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav13-1A0A075B644 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.99■□□□□ 0.47
Trav13-1A0A075B644 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav13-1A0A075B644 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav13-1A0A075B644 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.97■□□□□ 0.47
Trav13-1A0A075B644 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13-1A0A075B644 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav13-1A0A075B644 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Trav13-1A0A075B644 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav13-1A0A075B644 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav13-1A0A075B644 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav13-1A0A075B644 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13-1A0A075B644 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav13-1A0A075B644 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav13-1A0A075B644 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav13-1A0A075B644 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13-1A0A075B644 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13-1A0A075B644 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav13-1A0A075B644 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13-1A0A075B644 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13-1A0A075B644 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13-1A0A075B644 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13-1A0A075B644 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13-1A0A075B644 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13-1A0A075B644 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13-1A0A075B644 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13-1A0A075B644 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.88■□□□□ 0.45
Trav13-1A0A075B644 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13-1A0A075B644 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13-1A0A075B644 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13-1A0A075B644 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13-1A0A075B644 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13-1A0A075B644 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav13-1A0A075B644 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13-1A0A075B644 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13-1A0A075B644 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trav13-1A0A075B644 Gm45855-201ENSMUST00000212546 880 ntBASIC17.84■□□□□ 0.45
Trav13-1A0A075B644 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.82■□□□□ 0.44
Trav13-1A0A075B644 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms