Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8-1A0A075B641 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8-1A0A075B641 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8-1A0A075B641 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8-1A0A075B641 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8-1A0A075B641 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8-1A0A075B641 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8-1A0A075B641 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav8-1A0A075B641 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8-1A0A075B641 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav8-1A0A075B641 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8-1A0A075B641 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8-1A0A075B641 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8-1A0A075B641 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav8-1A0A075B641 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Trav8-1A0A075B641 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8-1A0A075B641 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav8-1A0A075B641 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav8-1A0A075B641 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trav8-1A0A075B641 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav8-1A0A075B641 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav8-1A0A075B641 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav8-1A0A075B641 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Trav8-1A0A075B641 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav8-1A0A075B641 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8-1A0A075B641 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8-1A0A075B641 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav8-1A0A075B641 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8-1A0A075B641 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8-1A0A075B641 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav8-1A0A075B641 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trav8-1A0A075B641 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav8-1A0A075B641 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav8-1A0A075B641 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8-1A0A075B641 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav8-1A0A075B641 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8-1A0A075B641 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8-1A0A075B641 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8-1A0A075B641 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8-1A0A075B641 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8-1A0A075B641 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav8-1A0A075B641 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Trav8-1A0A075B641 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8-1A0A075B641 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav8-1A0A075B641 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8-1A0A075B641 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav8-1A0A075B641 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav8-1A0A075B641 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav8-1A0A075B641 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trav8-1A0A075B641 Gm27325-201ENSMUST00000175467 74 ntBASIC18.14■□□□□ 0.49
Trav8-1A0A075B641 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8-1A0A075B641 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8-1A0A075B641 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8-1A0A075B641 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.12■□□□□ 0.49
Trav8-1A0A075B641 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8-1A0A075B641 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8-1A0A075B641 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav8-1A0A075B641 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8-1A0A075B641 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.1■□□□□ 0.49
Trav8-1A0A075B641 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav8-1A0A075B641 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav8-1A0A075B641 Amer2-203ENSMUST00000225247 2662 ntBASIC18.07■□□□□ 0.48
Trav8-1A0A075B641 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8-1A0A075B641 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav8-1A0A075B641 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav8-1A0A075B641 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav8-1A0A075B641 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8-1A0A075B641 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8-1A0A075B641 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8-1A0A075B641 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8-1A0A075B641 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8-1A0A075B641 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8-1A0A075B641 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8-1A0A075B641 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8-1A0A075B641 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav8-1A0A075B641 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav8-1A0A075B641 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav8-1A0A075B641 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8-1A0A075B641 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav8-1A0A075B641 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8-1A0A075B641 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8-1A0A075B641 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav8-1A0A075B641 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Trav8-1A0A075B641 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8-1A0A075B641 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8-1A0A075B641 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8-1A0A075B641 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.97■□□□□ 0.47
Trav8-1A0A075B641 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8-1A0A075B641 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8-1A0A075B641 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav8-1A0A075B641 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav8-1A0A075B641 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav8-1A0A075B641 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav8-1A0A075B641 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8-1A0A075B641 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8-1A0A075B641 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8-1A0A075B641 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav8-1A0A075B641 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8-1A0A075B641 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8-1A0A075B641 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms