Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav16nA0A075B634 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trav16nA0A075B634 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Trav16nA0A075B634 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav16nA0A075B634 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.46■□□□□ 0.71
Trav16nA0A075B634 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Trav16nA0A075B634 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav16nA0A075B634 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.44■□□□□ 0.7
Trav16nA0A075B634 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.43■□□□□ 0.7
Trav16nA0A075B634 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav16nA0A075B634 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav16nA0A075B634 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav16nA0A075B634 Rab21-202ENSMUST00000218831 843 ntBASIC19.39■□□□□ 0.69
Trav16nA0A075B634 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav16nA0A075B634 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav16nA0A075B634 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.39■□□□□ 0.69
Trav16nA0A075B634 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav16nA0A075B634 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav16nA0A075B634 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav16nA0A075B634 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav16nA0A075B634 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav16nA0A075B634 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trav16nA0A075B634 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.36■□□□□ 0.69
Trav16nA0A075B634 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trav16nA0A075B634 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav16nA0A075B634 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trav16nA0A075B634 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.34■□□□□ 0.69
Trav16nA0A075B634 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Trav16nA0A075B634 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav16nA0A075B634 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav16nA0A075B634 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav16nA0A075B634 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav16nA0A075B634 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav16nA0A075B634 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav16nA0A075B634 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav16nA0A075B634 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav16nA0A075B634 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav16nA0A075B634 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav16nA0A075B634 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav16nA0A075B634 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav16nA0A075B634 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trav16nA0A075B634 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav16nA0A075B634 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav16nA0A075B634 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav16nA0A075B634 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav16nA0A075B634 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav16nA0A075B634 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trav16nA0A075B634 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav16nA0A075B634 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav16nA0A075B634 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav16nA0A075B634 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav16nA0A075B634 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav16nA0A075B634 Mipep-204ENSMUST00000225043 1548 ntBASIC19.23■□□□□ 0.67
Trav16nA0A075B634 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav16nA0A075B634 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav16nA0A075B634 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav16nA0A075B634 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav16nA0A075B634 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav16nA0A075B634 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav16nA0A075B634 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trav16nA0A075B634 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav16nA0A075B634 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav16nA0A075B634 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav16nA0A075B634 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.18■□□□□ 0.66
Trav16nA0A075B634 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav16nA0A075B634 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav16nA0A075B634 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav16nA0A075B634 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav16nA0A075B634 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav16nA0A075B634 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.13■□□□□ 0.65
Trav16nA0A075B634 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav16nA0A075B634 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav16nA0A075B634 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trav16nA0A075B634 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trav16nA0A075B634 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav16nA0A075B634 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trav16nA0A075B634 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav16nA0A075B634 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav16nA0A075B634 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav16nA0A075B634 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav16nA0A075B634 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav16nA0A075B634 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav16nA0A075B634 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav16nA0A075B634 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
Trav16nA0A075B634 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav16nA0A075B634 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav16nA0A075B634 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav16nA0A075B634 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
Trav16nA0A075B634 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav16nA0A075B634 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav16nA0A075B634 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav16nA0A075B634 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav16nA0A075B634 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.03■□□□□ 0.64
Trav16nA0A075B634 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav16nA0A075B634 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav16nA0A075B634 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav16nA0A075B634 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav16nA0A075B634 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Trav16nA0A075B634 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Trav16nA0A075B634 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms