Protein–RNA interactions for Protein: A0A075B5L7

Igkv4-80, Immunoglobulin kappa variable 4-80 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-80A0A075B5L7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Igkv4-80A0A075B5L7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.57■■□□□ 1.2
Igkv4-80A0A075B5L7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Igkv4-80A0A075B5L7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.56■■□□□ 1.2
Igkv4-80A0A075B5L7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Igkv4-80A0A075B5L7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Igkv4-80A0A075B5L7 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.52■■□□□ 1.2
Igkv4-80A0A075B5L7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Igkv4-80A0A075B5L7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Igkv4-80A0A075B5L7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Igkv4-80A0A075B5L7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Igkv4-80A0A075B5L7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv4-80A0A075B5L7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv4-80A0A075B5L7 Gm24804-201ENSMUST00000174982 85 ntBASIC22.45■■□□□ 1.18
Igkv4-80A0A075B5L7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Igkv4-80A0A075B5L7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Igkv4-80A0A075B5L7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Igkv4-80A0A075B5L7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Igkv4-80A0A075B5L7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Igkv4-80A0A075B5L7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.41■■□□□ 1.18
Igkv4-80A0A075B5L7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv4-80A0A075B5L7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Igkv4-80A0A075B5L7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Igkv4-80A0A075B5L7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Igkv4-80A0A075B5L7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Igkv4-80A0A075B5L7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Igkv4-80A0A075B5L7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Igkv4-80A0A075B5L7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Igkv4-80A0A075B5L7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Igkv4-80A0A075B5L7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Igkv4-80A0A075B5L7 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.34■■□□□ 1.17
Igkv4-80A0A075B5L7 Peli2-204ENSMUST00000226513 1320 ntBASIC22.33■■□□□ 1.17
Igkv4-80A0A075B5L7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Igkv4-80A0A075B5L7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Igkv4-80A0A075B5L7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Igkv4-80A0A075B5L7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Igkv4-80A0A075B5L7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Igkv4-80A0A075B5L7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Igkv4-80A0A075B5L7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.26■■□□□ 1.15
Igkv4-80A0A075B5L7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.25■■□□□ 1.15
Igkv4-80A0A075B5L7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv4-80A0A075B5L7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv4-80A0A075B5L7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv4-80A0A075B5L7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Igkv4-80A0A075B5L7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.22■■□□□ 1.15
Igkv4-80A0A075B5L7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv4-80A0A075B5L7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Igkv4-80A0A075B5L7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Igkv4-80A0A075B5L7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Igkv4-80A0A075B5L7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Igkv4-80A0A075B5L7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Igkv4-80A0A075B5L7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Igkv4-80A0A075B5L7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Igkv4-80A0A075B5L7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.15■■□□□ 1.14
Igkv4-80A0A075B5L7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Igkv4-80A0A075B5L7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Igkv4-80A0A075B5L7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv4-80A0A075B5L7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv4-80A0A075B5L7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv4-80A0A075B5L7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv4-80A0A075B5L7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv4-80A0A075B5L7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Igkv4-80A0A075B5L7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.07■■□□□ 1.12
Igkv4-80A0A075B5L7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Igkv4-80A0A075B5L7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Igkv4-80A0A075B5L7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Igkv4-80A0A075B5L7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Igkv4-80A0A075B5L7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv4-80A0A075B5L7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
Igkv4-80A0A075B5L7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Igkv4-80A0A075B5L7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Igkv4-80A0A075B5L7 Gm16148-201ENSMUST00000119653 893 ntBASIC22.02■■□□□ 1.12
Igkv4-80A0A075B5L7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.01■■□□□ 1.11
Igkv4-80A0A075B5L7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Igkv4-80A0A075B5L7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22■■□□□ 1.11
Igkv4-80A0A075B5L7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Igkv4-80A0A075B5L7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv4-80A0A075B5L7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.99■■□□□ 1.11
Igkv4-80A0A075B5L7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Igkv4-80A0A075B5L7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Igkv4-80A0A075B5L7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Igkv4-80A0A075B5L7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Igkv4-80A0A075B5L7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Igkv4-80A0A075B5L7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Igkv4-80A0A075B5L7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.95■■□□□ 1.1
Igkv4-80A0A075B5L7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Igkv4-80A0A075B5L7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Igkv4-80A0A075B5L7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Igkv4-80A0A075B5L7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.93■■□□□ 1.1
Igkv4-80A0A075B5L7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Igkv4-80A0A075B5L7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Igkv4-80A0A075B5L7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Igkv4-80A0A075B5L7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Igkv4-80A0A075B5L7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Igkv4-80A0A075B5L7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Igkv4-80A0A075B5L7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Igkv4-80A0A075B5L7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Igkv4-80A0A075B5L7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Igkv4-80A0A075B5L7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Igkv4-80A0A075B5L7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms