Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb1S4R1E0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb1S4R1E0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
H2afb1S4R1E0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb1S4R1E0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb1S4R1E0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
H2afb1S4R1E0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
H2afb1S4R1E0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Gm10399-202ENSMUST00000202768 748 ntBASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
H2afb1S4R1E0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Gm13238-201ENSMUST00000117655 780 ntBASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
H2afb1S4R1E0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.12■□□□□ 0.49
H2afb1S4R1E0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.12■□□□□ 0.49
H2afb1S4R1E0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb1S4R1E0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb1S4R1E0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb1S4R1E0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
H2afb1S4R1E0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
H2afb1S4R1E0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
H2afb1S4R1E0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
H2afb1S4R1E0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.09■□□□□ 0.49
H2afb1S4R1E0 Gm10232-201ENSMUST00000089221 720 ntBASIC18.09■□□□□ 0.49
H2afb1S4R1E0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2afb1S4R1E0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.08■□□□□ 0.49
H2afb1S4R1E0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
H2afb1S4R1E0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.08■□□□□ 0.49
H2afb1S4R1E0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
H2afb1S4R1E0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
H2afb1S4R1E0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.08■□□□□ 0.48
H2afb1S4R1E0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2afb1S4R1E0 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.08■□□□□ 0.48
H2afb1S4R1E0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
H2afb1S4R1E0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2afb1S4R1E0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
H2afb1S4R1E0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms