Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chrna6Q9R0W9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chrna6Q9R0W9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chrna6Q9R0W9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.43■□□□□ 0.86
Chrna6Q9R0W9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.43■□□□□ 0.86
Chrna6Q9R0W9 Gm27454-201ENSMUST00000185090 204 ntBASIC20.43■□□□□ 0.86
Chrna6Q9R0W9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.43■□□□□ 0.86
Chrna6Q9R0W9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chrna6Q9R0W9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chrna6Q9R0W9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chrna6Q9R0W9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chrna6Q9R0W9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chrna6Q9R0W9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chrna6Q9R0W9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Chrna6Q9R0W9 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.41■□□□□ 0.86
Chrna6Q9R0W9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.41■□□□□ 0.86
Chrna6Q9R0W9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chrna6Q9R0W9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.4■□□□□ 0.86
Chrna6Q9R0W9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chrna6Q9R0W9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chrna6Q9R0W9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chrna6Q9R0W9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chrna6Q9R0W9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Chrna6Q9R0W9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chrna6Q9R0W9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chrna6Q9R0W9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.39■□□□□ 0.85
Chrna6Q9R0W9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chrna6Q9R0W9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Chrna6Q9R0W9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chrna6Q9R0W9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Chrna6Q9R0W9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chrna6Q9R0W9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.38■□□□□ 0.85
Chrna6Q9R0W9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chrna6Q9R0W9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chrna6Q9R0W9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Chrna6Q9R0W9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Chrna6Q9R0W9 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.38■□□□□ 0.85
Chrna6Q9R0W9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.38■□□□□ 0.85
Chrna6Q9R0W9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chrna6Q9R0W9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chrna6Q9R0W9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chrna6Q9R0W9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chrna6Q9R0W9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chrna6Q9R0W9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chrna6Q9R0W9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Chrna6Q9R0W9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Chrna6Q9R0W9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chrna6Q9R0W9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chrna6Q9R0W9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Chrna6Q9R0W9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chrna6Q9R0W9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.35■□□□□ 0.85
Chrna6Q9R0W9 Gm45417-201ENSMUST00000209533 758 ntBASIC20.35■□□□□ 0.85
Chrna6Q9R0W9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Chrna6Q9R0W9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chrna6Q9R0W9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chrna6Q9R0W9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chrna6Q9R0W9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chrna6Q9R0W9 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.34■□□□□ 0.85
Chrna6Q9R0W9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chrna6Q9R0W9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chrna6Q9R0W9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chrna6Q9R0W9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chrna6Q9R0W9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chrna6Q9R0W9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chrna6Q9R0W9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Chrna6Q9R0W9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chrna6Q9R0W9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms