Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.75■□□□□ 0.91
Col4a4Q9QZR9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a4Q9QZR9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Col4a4Q9QZR9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a4Q9QZR9 Gm8520-201ENSMUST00000186517 868 ntBASIC20.74■□□□□ 0.91
Col4a4Q9QZR9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a4Q9QZR9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
Col4a4Q9QZR9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a4Q9QZR9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a4Q9QZR9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a4Q9QZR9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a4Q9QZR9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.74■□□□□ 0.91
Col4a4Q9QZR9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.73■□□□□ 0.91
Col4a4Q9QZR9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a4Q9QZR9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Col4a4Q9QZR9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a4Q9QZR9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a4Q9QZR9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a4Q9QZR9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a4Q9QZR9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a4Q9QZR9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a4Q9QZR9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Gm5408-201ENSMUST00000197998 747 ntBASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col4a4Q9QZR9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Col4a4Q9QZR9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Col4a4Q9QZR9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a4Q9QZR9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a4Q9QZR9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col4a4Q9QZR9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.69■□□□□ 0.9
Col4a4Q9QZR9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.69■□□□□ 0.9
Col4a4Q9QZR9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.69■□□□□ 0.9
Col4a4Q9QZR9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a4Q9QZR9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a4Q9QZR9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col4a4Q9QZR9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a4Q9QZR9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col4a4Q9QZR9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Col4a4Q9QZR9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a4Q9QZR9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Col4a4Q9QZR9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col4a4Q9QZR9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a4Q9QZR9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a4Q9QZR9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col4a4Q9QZR9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Col4a4Q9QZR9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 Gm10812-201ENSMUST00000099864 546 ntBASIC20.67■□□□□ 0.9
Col4a4Q9QZR9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a4Q9QZR9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a4Q9QZR9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.66■□□□□ 0.9
Col4a4Q9QZR9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a4Q9QZR9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a4Q9QZR9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a4Q9QZR9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a4Q9QZR9 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.65■□□□□ 0.9
Col4a4Q9QZR9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a4Q9QZR9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a4Q9QZR9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col4a4Q9QZR9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.64■□□□□ 0.9
Col4a4Q9QZR9 Gm26524-201ENSMUST00000192339 390 ntBASIC20.64■□□□□ 0.9
Col4a4Q9QZR9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.64■□□□□ 0.9
Col4a4Q9QZR9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a4Q9QZR9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a4Q9QZR9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a4Q9QZR9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a4Q9QZR9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a4Q9QZR9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms