Protein–RNA interactions for Protein: Q9D287

Bcas2, Pre-mRNA-splicing factor SPF27, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bcas2Q9D287 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Bcas2Q9D287 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Bcas2Q9D287 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Bcas2Q9D287 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.47■□□□□ 0.71
Bcas2Q9D287 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.47■□□□□ 0.71
Bcas2Q9D287 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bcas2Q9D287 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bcas2Q9D287 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Bcas2Q9D287 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bcas2Q9D287 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Bcas2Q9D287 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Bcas2Q9D287 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Bcas2Q9D287 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.46■□□□□ 0.71
Bcas2Q9D287 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Bcas2Q9D287 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Bcas2Q9D287 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Bcas2Q9D287 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Bcas2Q9D287 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.46■□□□□ 0.71
Bcas2Q9D287 Gm5812-201ENSMUST00000061073 957 ntBASIC19.46■□□□□ 0.71
Bcas2Q9D287 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Bcas2Q9D287 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Bcas2Q9D287 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Bcas2Q9D287 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.45■□□□□ 0.7
Bcas2Q9D287 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Bcas2Q9D287 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.45■□□□□ 0.7
Bcas2Q9D287 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Bcas2Q9D287 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Bcas2Q9D287 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Bcas2Q9D287 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Bcas2Q9D287 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Bcas2Q9D287 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Bcas2Q9D287 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Bcas2Q9D287 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Gm10399-202ENSMUST00000202768 748 ntBASIC19.44■□□□□ 0.7
Bcas2Q9D287 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.44■□□□□ 0.7
Bcas2Q9D287 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bcas2Q9D287 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bcas2Q9D287 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bcas2Q9D287 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.43■□□□□ 0.7
Bcas2Q9D287 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bcas2Q9D287 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bcas2Q9D287 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Bcas2Q9D287 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bcas2Q9D287 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.42■□□□□ 0.7
Bcas2Q9D287 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Bcas2Q9D287 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bcas2Q9D287 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Bcas2Q9D287 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bcas2Q9D287 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Bcas2Q9D287 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bcas2Q9D287 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.42■□□□□ 0.7
Bcas2Q9D287 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Bcas2Q9D287 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bcas2Q9D287 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Bcas2Q9D287 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.41■□□□□ 0.7
Bcas2Q9D287 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.41■□□□□ 0.7
Bcas2Q9D287 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bcas2Q9D287 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bcas2Q9D287 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Bcas2Q9D287 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bcas2Q9D287 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bcas2Q9D287 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.4■□□□□ 0.7
Bcas2Q9D287 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Bcas2Q9D287 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.4■□□□□ 0.7
Bcas2Q9D287 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.4■□□□□ 0.7
Bcas2Q9D287 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.4■□□□□ 0.7
Bcas2Q9D287 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bcas2Q9D287 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bcas2Q9D287 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Bcas2Q9D287 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Bcas2Q9D287 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.39■□□□□ 0.7
Bcas2Q9D287 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Bcas2Q9D287 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.39■□□□□ 0.69
Bcas2Q9D287 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Bcas2Q9D287 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bcas2Q9D287 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
Bcas2Q9D287 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms