Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.83■□□□□ 0.76
Trim33Q99PP7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim33Q99PP7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.83■□□□□ 0.76
Trim33Q99PP7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trim33Q99PP7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.82■□□□□ 0.76
Trim33Q99PP7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trim33Q99PP7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim33Q99PP7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim33Q99PP7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Trim33Q99PP7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim33Q99PP7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.81■□□□□ 0.76
Trim33Q99PP7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim33Q99PP7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Gm12922-201ENSMUST00000120626 809 ntBASIC19.8■□□□□ 0.76
Trim33Q99PP7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim33Q99PP7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.8■□□□□ 0.76
Trim33Q99PP7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim33Q99PP7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim33Q99PP7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.79■□□□□ 0.76
Trim33Q99PP7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Trim33Q99PP7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim33Q99PP7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim33Q99PP7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim33Q99PP7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim33Q99PP7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim33Q99PP7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.77■□□□□ 0.76
Trim33Q99PP7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim33Q99PP7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim33Q99PP7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim33Q99PP7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim33Q99PP7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.77■□□□□ 0.76
Trim33Q99PP7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim33Q99PP7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim33Q99PP7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim33Q99PP7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim33Q99PP7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim33Q99PP7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.76■□□□□ 0.75
Trim33Q99PP7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim33Q99PP7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Trim33Q99PP7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim33Q99PP7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.76■□□□□ 0.75
Trim33Q99PP7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim33Q99PP7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim33Q99PP7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim33Q99PP7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim33Q99PP7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim33Q99PP7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim33Q99PP7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim33Q99PP7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.75■□□□□ 0.75
Trim33Q99PP7 Golgb1-201ENSMUST00000023534 498 ntBASIC19.75■□□□□ 0.75
Trim33Q99PP7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim33Q99PP7 Gm9847-201ENSMUST00000052528 599 ntBASIC19.75■□□□□ 0.75
Trim33Q99PP7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim33Q99PP7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim33Q99PP7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim33Q99PP7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim33Q99PP7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim33Q99PP7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Trim33Q99PP7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms