Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.67■□□□□ 0.9
Gtf2ird2Q99NI3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf2ird2Q99NI3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf2ird2Q99NI3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf2ird2Q99NI3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf2ird2Q99NI3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Gtf2ird2Q99NI3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.66■□□□□ 0.9
Gtf2ird2Q99NI3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf2ird2Q99NI3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf2ird2Q99NI3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf2ird2Q99NI3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf2ird2Q99NI3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf2ird2Q99NI3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf2ird2Q99NI3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf2ird2Q99NI3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf2ird2Q99NI3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Gtf2ird2Q99NI3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf2ird2Q99NI3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf2ird2Q99NI3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gtf2ird2Q99NI3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gtf2ird2Q99NI3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf2ird2Q99NI3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.64■□□□□ 0.89
Gtf2ird2Q99NI3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.64■□□□□ 0.89
Gtf2ird2Q99NI3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.64■□□□□ 0.89
Gtf2ird2Q99NI3 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.64■□□□□ 0.89
Gtf2ird2Q99NI3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf2ird2Q99NI3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf2ird2Q99NI3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf2ird2Q99NI3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Gtf2ird2Q99NI3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf2ird2Q99NI3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf2ird2Q99NI3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf2ird2Q99NI3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.6■□□□□ 0.89
Gtf2ird2Q99NI3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf2ird2Q99NI3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Gtf2ird2Q99NI3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.6■□□□□ 0.89
Gtf2ird2Q99NI3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf2ird2Q99NI3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf2ird2Q99NI3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf2ird2Q99NI3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf2ird2Q99NI3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gtf2ird2Q99NI3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Gtf2ird2Q99NI3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.58■□□□□ 0.89
Gtf2ird2Q99NI3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gtf2ird2Q99NI3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gtf2ird2Q99NI3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gtf2ird2Q99NI3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Gtf2ird2Q99NI3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms