Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.92■■□□□ 1.42
Col20a1Q923P0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col20a1Q923P0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col20a1Q923P0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col20a1Q923P0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.92■■□□□ 1.42
Col20a1Q923P0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col20a1Q923P0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col20a1Q923P0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col20a1Q923P0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col20a1Q923P0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col20a1Q923P0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.91■■□□□ 1.42
Col20a1Q923P0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col20a1Q923P0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col20a1Q923P0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Col20a1Q923P0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col20a1Q923P0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.9■■□□□ 1.42
Col20a1Q923P0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.9■■□□□ 1.42
Col20a1Q923P0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.89■■□□□ 1.42
Col20a1Q923P0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Col20a1Q923P0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Col20a1Q923P0 Smad6-203ENSMUST00000179458 273 ntBASIC23.89■■□□□ 1.42
Col20a1Q923P0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col20a1Q923P0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col20a1Q923P0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col20a1Q923P0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Col20a1Q923P0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Col20a1Q923P0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC23.88■■□□□ 1.41
Col20a1Q923P0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Col20a1Q923P0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col20a1Q923P0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col20a1Q923P0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col20a1Q923P0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col20a1Q923P0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col20a1Q923P0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Col20a1Q923P0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col20a1Q923P0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.87■■□□□ 1.41
Col20a1Q923P0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col20a1Q923P0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col20a1Q923P0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Col20a1Q923P0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col20a1Q923P0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.87■■□□□ 1.41
Col20a1Q923P0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col20a1Q923P0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col20a1Q923P0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.87■■□□□ 1.41
Col20a1Q923P0 Gm43060-201ENSMUST00000200621 289 ntBASIC23.86■■□□□ 1.41
Col20a1Q923P0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.86■■□□□ 1.41
Col20a1Q923P0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Col20a1Q923P0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col20a1Q923P0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Col20a1Q923P0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col20a1Q923P0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col20a1Q923P0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col20a1Q923P0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Col20a1Q923P0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Col20a1Q923P0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col20a1Q923P0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col20a1Q923P0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col20a1Q923P0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col20a1Q923P0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.83■■□□□ 1.41
Col20a1Q923P0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col20a1Q923P0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col20a1Q923P0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col20a1Q923P0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Col20a1Q923P0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.82■■□□□ 1.4
Col20a1Q923P0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col20a1Q923P0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col20a1Q923P0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col20a1Q923P0 Gm40848-201ENSMUST00000221998 324 ntBASIC23.82■■□□□ 1.4
Col20a1Q923P0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.81■■□□□ 1.4
Col20a1Q923P0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col20a1Q923P0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col20a1Q923P0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.81■■□□□ 1.4
Col20a1Q923P0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.81■■□□□ 1.4
Col20a1Q923P0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col20a1Q923P0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Col20a1Q923P0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Col20a1Q923P0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
Col20a1Q923P0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col20a1Q923P0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col20a1Q923P0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col20a1Q923P0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col20a1Q923P0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Col20a1Q923P0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Col20a1Q923P0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col20a1Q923P0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col20a1Q923P0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col20a1Q923P0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col20a1Q923P0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.78■■□□□ 1.4
Col20a1Q923P0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms