Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx41Q91VN6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx41Q91VN6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx41Q91VN6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Ddx41Q91VN6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Ddx41Q91VN6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.97■■□□□ 1.27
Ddx41Q91VN6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx41Q91VN6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx41Q91VN6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
Ddx41Q91VN6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx41Q91VN6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx41Q91VN6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
Ddx41Q91VN6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
Ddx41Q91VN6 Gm6139-201ENSMUST00000079261 882 ntBASIC22.96■■□□□ 1.27
Ddx41Q91VN6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Ddx41Q91VN6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx41Q91VN6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx41Q91VN6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx41Q91VN6 Golph3-202ENSMUST00000226517 2359 ntBASIC22.96■■□□□ 1.27
Ddx41Q91VN6 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.95■■□□□ 1.26
Ddx41Q91VN6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx41Q91VN6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx41Q91VN6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx41Q91VN6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx41Q91VN6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx41Q91VN6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
Ddx41Q91VN6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Ddx41Q91VN6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.94■■□□□ 1.26
Ddx41Q91VN6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx41Q91VN6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Ddx41Q91VN6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx41Q91VN6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Ddx41Q91VN6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx41Q91VN6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx41Q91VN6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx41Q91VN6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx41Q91VN6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx41Q91VN6 Gm8770-201ENSMUST00000121113 1109 ntBASIC22.93■■□□□ 1.26
Ddx41Q91VN6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.93■■□□□ 1.26
Ddx41Q91VN6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Ddx41Q91VN6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.93■■□□□ 1.26
Ddx41Q91VN6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx41Q91VN6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx41Q91VN6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.92■■□□□ 1.26
Ddx41Q91VN6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx41Q91VN6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx41Q91VN6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx41Q91VN6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx41Q91VN6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx41Q91VN6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx41Q91VN6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx41Q91VN6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx41Q91VN6 Mir7075-201ENSMUST00000184187 82 ntBASIC22.9■■□□□ 1.26
Ddx41Q91VN6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx41Q91VN6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.9■■□□□ 1.26
Ddx41Q91VN6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx41Q91VN6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.9■■□□□ 1.26
Ddx41Q91VN6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx41Q91VN6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Ddx41Q91VN6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ddx41Q91VN6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
Ddx41Q91VN6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ddx41Q91VN6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ddx41Q91VN6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Ddx41Q91VN6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx41Q91VN6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx41Q91VN6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx41Q91VN6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Ddx41Q91VN6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx41Q91VN6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx41Q91VN6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Ddx41Q91VN6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Ddx41Q91VN6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx41Q91VN6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx41Q91VN6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx41Q91VN6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
Ddx41Q91VN6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Ddx41Q91VN6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx41Q91VN6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.87■■□□□ 1.25
Ddx41Q91VN6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx41Q91VN6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx41Q91VN6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx41Q91VN6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx41Q91VN6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx41Q91VN6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.86■■□□□ 1.25
Ddx41Q91VN6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.86■■□□□ 1.25
Ddx41Q91VN6 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.86■■□□□ 1.25
Ddx41Q91VN6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx41Q91VN6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx41Q91VN6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms