Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrif1Q8CDD9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrif1Q8CDD9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lrif1Q8CDD9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrif1Q8CDD9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lrif1Q8CDD9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lrif1Q8CDD9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrif1Q8CDD9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lrif1Q8CDD9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lrif1Q8CDD9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrif1Q8CDD9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrif1Q8CDD9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrif1Q8CDD9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lrif1Q8CDD9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrif1Q8CDD9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.84■□□□□ 0.77
Lrif1Q8CDD9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lrif1Q8CDD9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrif1Q8CDD9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
Lrif1Q8CDD9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Lrif1Q8CDD9 Gm15820-201ENSMUST00000201566 728 ntBASIC19.83■□□□□ 0.77
Lrif1Q8CDD9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrif1Q8CDD9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrif1Q8CDD9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lrif1Q8CDD9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrif1Q8CDD9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrif1Q8CDD9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrif1Q8CDD9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrif1Q8CDD9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrif1Q8CDD9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lrif1Q8CDD9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Lrif1Q8CDD9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrif1Q8CDD9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrif1Q8CDD9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrif1Q8CDD9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Lrif1Q8CDD9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrif1Q8CDD9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrif1Q8CDD9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.79■□□□□ 0.76
Lrif1Q8CDD9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.79■□□□□ 0.76
Lrif1Q8CDD9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Lrif1Q8CDD9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lrif1Q8CDD9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Lrif1Q8CDD9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrif1Q8CDD9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lrif1Q8CDD9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrif1Q8CDD9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrif1Q8CDD9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrif1Q8CDD9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrif1Q8CDD9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrif1Q8CDD9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrif1Q8CDD9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrif1Q8CDD9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrif1Q8CDD9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.76■□□□□ 0.75
Lrif1Q8CDD9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrif1Q8CDD9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms