Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.69■■□□□ 1.38
Alx1Q8C8B0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Alx1Q8C8B0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
Alx1Q8C8B0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Alx1Q8C8B0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Alx1Q8C8B0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Alx1Q8C8B0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Alx1Q8C8B0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Alx1Q8C8B0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Alx1Q8C8B0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Alx1Q8C8B0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Alx1Q8C8B0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.68■■□□□ 1.38
Alx1Q8C8B0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Alx1Q8C8B0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Alx1Q8C8B0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Alx1Q8C8B0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Alx1Q8C8B0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Alx1Q8C8B0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Alx1Q8C8B0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Alx1Q8C8B0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Alx1Q8C8B0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Alx1Q8C8B0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Alx1Q8C8B0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Alx1Q8C8B0 Gm45417-201ENSMUST00000209533 758 ntBASIC23.67■■□□□ 1.38
Alx1Q8C8B0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Alx1Q8C8B0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Alx1Q8C8B0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Alx1Q8C8B0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.66■■□□□ 1.38
Alx1Q8C8B0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Alx1Q8C8B0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Alx1Q8C8B0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Alx1Q8C8B0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Alx1Q8C8B0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Alx1Q8C8B0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Alx1Q8C8B0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
Alx1Q8C8B0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Alx1Q8C8B0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Alx1Q8C8B0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Alx1Q8C8B0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.64■■□□□ 1.38
Alx1Q8C8B0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Alx1Q8C8B0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Alx1Q8C8B0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Alx1Q8C8B0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.64■■□□□ 1.37
Alx1Q8C8B0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Alx1Q8C8B0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Alx1Q8C8B0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Alx1Q8C8B0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Alx1Q8C8B0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Alx1Q8C8B0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Alx1Q8C8B0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Alx1Q8C8B0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Alx1Q8C8B0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Alx1Q8C8B0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Alx1Q8C8B0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Alx1Q8C8B0 Gm12251-201ENSMUST00000117893 792 ntBASIC23.62■■□□□ 1.37
Alx1Q8C8B0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.62■■□□□ 1.37
Alx1Q8C8B0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Alx1Q8C8B0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Alx1Q8C8B0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Alx1Q8C8B0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Alx1Q8C8B0 Mir7075-201ENSMUST00000184187 82 ntBASIC23.61■■□□□ 1.37
Alx1Q8C8B0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Alx1Q8C8B0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Alx1Q8C8B0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Spcs1-204ENSMUST00000226782 949 ntBASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Gm6139-201ENSMUST00000079261 882 ntBASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Alx1Q8C8B0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Alx1Q8C8B0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
Alx1Q8C8B0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Alx1Q8C8B0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Alx1Q8C8B0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Alx1Q8C8B0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
Alx1Q8C8B0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Alx1Q8C8B0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Alx1Q8C8B0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
Alx1Q8C8B0 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.57■■□□□ 1.36
Alx1Q8C8B0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.57■■□□□ 1.36
Alx1Q8C8B0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Alx1Q8C8B0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms