Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scfd1Q8BRF7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Scfd1Q8BRF7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.18■■□□□ 1.3
Scfd1Q8BRF7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scfd1Q8BRF7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scfd1Q8BRF7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scfd1Q8BRF7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Scfd1Q8BRF7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Scfd1Q8BRF7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scfd1Q8BRF7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.17■■□□□ 1.3
Scfd1Q8BRF7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Scfd1Q8BRF7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Scfd1Q8BRF7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scfd1Q8BRF7 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.16■■□□□ 1.3
Scfd1Q8BRF7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Scfd1Q8BRF7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scfd1Q8BRF7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scfd1Q8BRF7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Scfd1Q8BRF7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Scfd1Q8BRF7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scfd1Q8BRF7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scfd1Q8BRF7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Scfd1Q8BRF7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.15■■□□□ 1.3
Scfd1Q8BRF7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scfd1Q8BRF7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scfd1Q8BRF7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scfd1Q8BRF7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Scfd1Q8BRF7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.14■■□□□ 1.3
Scfd1Q8BRF7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.14■■□□□ 1.3
Scfd1Q8BRF7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Scfd1Q8BRF7 Gm40848-201ENSMUST00000221998 324 ntBASIC23.14■■□□□ 1.29
Scfd1Q8BRF7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Scfd1Q8BRF7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scfd1Q8BRF7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Scfd1Q8BRF7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scfd1Q8BRF7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scfd1Q8BRF7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Scfd1Q8BRF7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Scfd1Q8BRF7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scfd1Q8BRF7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scfd1Q8BRF7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Scfd1Q8BRF7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Scfd1Q8BRF7 Gm5874-201ENSMUST00000096101 508 ntBASIC23.11■■□□□ 1.29
Scfd1Q8BRF7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scfd1Q8BRF7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scfd1Q8BRF7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Scfd1Q8BRF7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Scfd1Q8BRF7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.1■■□□□ 1.29
Scfd1Q8BRF7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scfd1Q8BRF7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Scfd1Q8BRF7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.1■■□□□ 1.29
Scfd1Q8BRF7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.1■■□□□ 1.29
Scfd1Q8BRF7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scfd1Q8BRF7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Scfd1Q8BRF7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Scfd1Q8BRF7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.09■■□□□ 1.29
Scfd1Q8BRF7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scfd1Q8BRF7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.09■■□□□ 1.29
Scfd1Q8BRF7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scfd1Q8BRF7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scfd1Q8BRF7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scfd1Q8BRF7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Scfd1Q8BRF7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scfd1Q8BRF7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Scfd1Q8BRF7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scfd1Q8BRF7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scfd1Q8BRF7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scfd1Q8BRF7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.08■■□□□ 1.29
Scfd1Q8BRF7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.08■■□□□ 1.29
Scfd1Q8BRF7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Scfd1Q8BRF7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scfd1Q8BRF7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Scfd1Q8BRF7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Scfd1Q8BRF7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Scfd1Q8BRF7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Scfd1Q8BRF7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Scfd1Q8BRF7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms