Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4dQ8BGV9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4dQ8BGV9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4dQ8BGV9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4dQ8BGV9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4dQ8BGV9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4dQ8BGV9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Atg4dQ8BGV9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.85■□□□□ 0.61
Atg4dQ8BGV9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4dQ8BGV9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4dQ8BGV9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4dQ8BGV9 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.85■□□□□ 0.61
Atg4dQ8BGV9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4dQ8BGV9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4dQ8BGV9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atg4dQ8BGV9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Atg4dQ8BGV9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atg4dQ8BGV9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Atg4dQ8BGV9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg4dQ8BGV9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg4dQ8BGV9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg4dQ8BGV9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4dQ8BGV9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg4dQ8BGV9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg4dQ8BGV9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Atg4dQ8BGV9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.81■□□□□ 0.6
Atg4dQ8BGV9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atg4dQ8BGV9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Atg4dQ8BGV9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Atg4dQ8BGV9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atg4dQ8BGV9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4dQ8BGV9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4dQ8BGV9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4dQ8BGV9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4dQ8BGV9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4dQ8BGV9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4dQ8BGV9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4dQ8BGV9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4dQ8BGV9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4dQ8BGV9 Gm12821-201ENSMUST00000120022 600 ntBASIC18.79■□□□□ 0.6
Atg4dQ8BGV9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4dQ8BGV9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4dQ8BGV9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4dQ8BGV9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4dQ8BGV9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4dQ8BGV9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atg4dQ8BGV9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Atg4dQ8BGV9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4dQ8BGV9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Atg4dQ8BGV9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Atg4dQ8BGV9 Gm43137-201ENSMUST00000198052 594 ntBASIC18.78■□□□□ 0.6
Atg4dQ8BGV9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.78■□□□□ 0.6
Atg4dQ8BGV9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atg4dQ8BGV9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4dQ8BGV9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4dQ8BGV9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.77■□□□□ 0.6
Atg4dQ8BGV9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Atg4dQ8BGV9 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.77■□□□□ 0.6
Atg4dQ8BGV9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atg4dQ8BGV9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.77■□□□□ 0.59
Atg4dQ8BGV9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Atg4dQ8BGV9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 Gm27454-201ENSMUST00000185090 204 ntBASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atg4dQ8BGV9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.75■□□□□ 0.59
Atg4dQ8BGV9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Atg4dQ8BGV9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 159.6 ms