Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krr1Q8BGA5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Krr1Q8BGA5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Krr1Q8BGA5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krr1Q8BGA5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krr1Q8BGA5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krr1Q8BGA5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krr1Q8BGA5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Krr1Q8BGA5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Krr1Q8BGA5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Krr1Q8BGA5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Krr1Q8BGA5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krr1Q8BGA5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Krr1Q8BGA5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krr1Q8BGA5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krr1Q8BGA5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krr1Q8BGA5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krr1Q8BGA5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krr1Q8BGA5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Krr1Q8BGA5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krr1Q8BGA5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krr1Q8BGA5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Krr1Q8BGA5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krr1Q8BGA5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krr1Q8BGA5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krr1Q8BGA5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krr1Q8BGA5 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.86■□□□□ 0.61
Krr1Q8BGA5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krr1Q8BGA5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Krr1Q8BGA5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krr1Q8BGA5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krr1Q8BGA5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krr1Q8BGA5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Krr1Q8BGA5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krr1Q8BGA5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krr1Q8BGA5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krr1Q8BGA5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krr1Q8BGA5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krr1Q8BGA5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krr1Q8BGA5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Krr1Q8BGA5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.84■□□□□ 0.61
Krr1Q8BGA5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krr1Q8BGA5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Krr1Q8BGA5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.83■□□□□ 0.61
Krr1Q8BGA5 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.83■□□□□ 0.61
Krr1Q8BGA5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Krr1Q8BGA5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.61
Krr1Q8BGA5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Krr1Q8BGA5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krr1Q8BGA5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.83■□□□□ 0.6
Krr1Q8BGA5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.83■□□□□ 0.6
Krr1Q8BGA5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.83■□□□□ 0.6
Krr1Q8BGA5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krr1Q8BGA5 Gm10232-201ENSMUST00000089221 720 ntBASIC18.83■□□□□ 0.6
Krr1Q8BGA5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krr1Q8BGA5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krr1Q8BGA5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Krr1Q8BGA5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krr1Q8BGA5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.83■□□□□ 0.6
Krr1Q8BGA5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Krr1Q8BGA5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krr1Q8BGA5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms