Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Trnp1Q80ZI1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trnp1Q80ZI1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trnp1Q80ZI1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trnp1Q80ZI1 Reep4-203ENSMUST00000226563 1444 ntBASIC23.08■■□□□ 1.29
Trnp1Q80ZI1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trnp1Q80ZI1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.08■■□□□ 1.29
Trnp1Q80ZI1 Gm12441-201ENSMUST00000121806 588 ntBASIC23.08■■□□□ 1.29
Trnp1Q80ZI1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trnp1Q80ZI1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trnp1Q80ZI1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trnp1Q80ZI1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
Trnp1Q80ZI1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trnp1Q80ZI1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trnp1Q80ZI1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trnp1Q80ZI1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trnp1Q80ZI1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trnp1Q80ZI1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Trnp1Q80ZI1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trnp1Q80ZI1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trnp1Q80ZI1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trnp1Q80ZI1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trnp1Q80ZI1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Trnp1Q80ZI1 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.04■■□□□ 1.28
Trnp1Q80ZI1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trnp1Q80ZI1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.04■■□□□ 1.28
Trnp1Q80ZI1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.04■■□□□ 1.28
Trnp1Q80ZI1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Trnp1Q80ZI1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trnp1Q80ZI1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trnp1Q80ZI1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trnp1Q80ZI1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trnp1Q80ZI1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trnp1Q80ZI1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trnp1Q80ZI1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trnp1Q80ZI1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trnp1Q80ZI1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.02■■□□□ 1.28
Trnp1Q80ZI1 Gm7514-201ENSMUST00000209475 934 ntBASIC23.02■■□□□ 1.28
Trnp1Q80ZI1 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.02■■□□□ 1.28
Trnp1Q80ZI1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trnp1Q80ZI1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trnp1Q80ZI1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trnp1Q80ZI1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trnp1Q80ZI1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.01■■□□□ 1.27
Trnp1Q80ZI1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trnp1Q80ZI1 Gm10653-202ENSMUST00000139570 835 ntBASIC23.01■■□□□ 1.27
Trnp1Q80ZI1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trnp1Q80ZI1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trnp1Q80ZI1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trnp1Q80ZI1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trnp1Q80ZI1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trnp1Q80ZI1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Trnp1Q80ZI1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trnp1Q80ZI1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trnp1Q80ZI1 Gm27801-201ENSMUST00000184174 223 ntBASIC23■■□□□ 1.27
Trnp1Q80ZI1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC23■■□□□ 1.27
Trnp1Q80ZI1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23■■□□□ 1.27
Trnp1Q80ZI1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trnp1Q80ZI1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Trnp1Q80ZI1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trnp1Q80ZI1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trnp1Q80ZI1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trnp1Q80ZI1 Mir6236-201ENSMUST00000184437 123 ntBASIC22.99■■□□□ 1.27
Trnp1Q80ZI1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
Trnp1Q80ZI1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trnp1Q80ZI1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.99■■□□□ 1.27
Trnp1Q80ZI1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trnp1Q80ZI1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trnp1Q80ZI1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trnp1Q80ZI1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trnp1Q80ZI1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC22.98■■□□□ 1.27
Trnp1Q80ZI1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.98■■□□□ 1.27
Trnp1Q80ZI1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trnp1Q80ZI1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trnp1Q80ZI1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trnp1Q80ZI1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trnp1Q80ZI1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trnp1Q80ZI1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trnp1Q80ZI1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trnp1Q80ZI1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trnp1Q80ZI1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trnp1Q80ZI1 Mir5133-201ENSMUST00000174955 77 ntBASIC22.96■■□□□ 1.27
Trnp1Q80ZI1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trnp1Q80ZI1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.96■■□□□ 1.27
Trnp1Q80ZI1 Gm4968-201ENSMUST00000071458 858 ntBASIC22.96■■□□□ 1.27
Trnp1Q80ZI1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Trnp1Q80ZI1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Trnp1Q80ZI1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trnp1Q80ZI1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trnp1Q80ZI1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms