Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3hc1Q80YV2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3hc1Q80YV2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3hc1Q80YV2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3hc1Q80YV2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3hc1Q80YV2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.34■□□□□ 0.53
Zc3hc1Q80YV2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3hc1Q80YV2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3hc1Q80YV2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3hc1Q80YV2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Zc3hc1Q80YV2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.33■□□□□ 0.52
Zc3hc1Q80YV2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.33■□□□□ 0.52
Zc3hc1Q80YV2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.33■□□□□ 0.52
Zc3hc1Q80YV2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zc3hc1Q80YV2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zc3hc1Q80YV2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Zc3hc1Q80YV2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Zc3hc1Q80YV2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.33■□□□□ 0.52
Zc3hc1Q80YV2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Zc3hc1Q80YV2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3hc1Q80YV2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.32■□□□□ 0.52
Zc3hc1Q80YV2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3hc1Q80YV2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3hc1Q80YV2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3hc1Q80YV2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3hc1Q80YV2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Zc3hc1Q80YV2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.32■□□□□ 0.52
Zc3hc1Q80YV2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Zc3hc1Q80YV2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3hc1Q80YV2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zc3hc1Q80YV2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3hc1Q80YV2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3hc1Q80YV2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3hc1Q80YV2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3hc1Q80YV2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3hc1Q80YV2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3hc1Q80YV2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3hc1Q80YV2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3hc1Q80YV2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3hc1Q80YV2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zc3hc1Q80YV2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3hc1Q80YV2 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.29■□□□□ 0.52
Zc3hc1Q80YV2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3hc1Q80YV2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3hc1Q80YV2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zc3hc1Q80YV2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Zc3hc1Q80YV2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zc3hc1Q80YV2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zc3hc1Q80YV2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zc3hc1Q80YV2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zc3hc1Q80YV2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms