Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Usp8Q80U87 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp8Q80U87 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.06■□□□□ 0.8
Usp8Q80U87 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp8Q80U87 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp8Q80U87 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp8Q80U87 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Usp8Q80U87 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp8Q80U87 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp8Q80U87 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp8Q80U87 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp8Q80U87 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp8Q80U87 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp8Q80U87 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp8Q80U87 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.05■□□□□ 0.8
Usp8Q80U87 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Usp8Q80U87 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp8Q80U87 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp8Q80U87 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.05■□□□□ 0.8
Usp8Q80U87 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp8Q80U87 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Usp8Q80U87 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Usp8Q80U87 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.04■□□□□ 0.8
Usp8Q80U87 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp8Q80U87 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp8Q80U87 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.04■□□□□ 0.8
Usp8Q80U87 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp8Q80U87 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp8Q80U87 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp8Q80U87 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Usp8Q80U87 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp8Q80U87 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp8Q80U87 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp8Q80U87 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Usp8Q80U87 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp8Q80U87 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp8Q80U87 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Usp8Q80U87 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp8Q80U87 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp8Q80U87 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp8Q80U87 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp8Q80U87 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp8Q80U87 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp8Q80U87 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp8Q80U87 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp8Q80U87 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp8Q80U87 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp8Q80U87 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp8Q80U87 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp8Q80U87 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp8Q80U87 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp8Q80U87 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.01■□□□□ 0.79
Usp8Q80U87 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp8Q80U87 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp8Q80U87 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp8Q80U87 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp8Q80U87 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp8Q80U87 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Usp8Q80U87 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp8Q80U87 Gm18755-201ENSMUST00000218030 1099 ntBASIC20■□□□□ 0.79
Usp8Q80U87 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp8Q80U87 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp8Q80U87 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp8Q80U87 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Usp8Q80U87 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Usp8Q80U87 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp8Q80U87 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp8Q80U87 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.99■□□□□ 0.79
Usp8Q80U87 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.99■□□□□ 0.79
Usp8Q80U87 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp8Q80U87 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp8Q80U87 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp8Q80U87 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp8Q80U87 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Usp8Q80U87 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp8Q80U87 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp8Q80U87 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp8Q80U87 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp8Q80U87 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp8Q80U87 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Usp8Q80U87 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.98■□□□□ 0.79
Usp8Q80U87 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Usp8Q80U87 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.98■□□□□ 0.79
Usp8Q80U87 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp8Q80U87 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp8Q80U87 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp8Q80U87 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp8Q80U87 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp8Q80U87 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Usp8Q80U87 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp8Q80U87 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.97■□□□□ 0.79
Usp8Q80U87 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp8Q80U87 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp8Q80U87 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.97■□□□□ 0.79
Usp8Q80U87 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp8Q80U87 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp8Q80U87 Gm40881-201ENSMUST00000223397 166 ntBASIC19.96■□□□□ 0.79
Usp8Q80U87 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp8Q80U87 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Usp8Q80U87 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms