Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Prpf38bQ80SY5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Prpf38bQ80SY5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38bQ80SY5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38bQ80SY5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38bQ80SY5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38bQ80SY5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.95■□□□□ 0.94
Prpf38bQ80SY5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Prpf38bQ80SY5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38bQ80SY5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38bQ80SY5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38bQ80SY5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38bQ80SY5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.94■□□□□ 0.94
Prpf38bQ80SY5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Prpf38bQ80SY5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Prpf38bQ80SY5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38bQ80SY5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38bQ80SY5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38bQ80SY5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38bQ80SY5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Prpf38bQ80SY5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.92■□□□□ 0.94
Prpf38bQ80SY5 Gm43060-201ENSMUST00000200621 289 ntBASIC20.92■□□□□ 0.94
Prpf38bQ80SY5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.92■□□□□ 0.94
Prpf38bQ80SY5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38bQ80SY5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38bQ80SY5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38bQ80SY5 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.92■□□□□ 0.94
Prpf38bQ80SY5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Gm26833-201ENSMUST00000180899 440 ntBASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38bQ80SY5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38bQ80SY5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf38bQ80SY5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf38bQ80SY5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38bQ80SY5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.89■□□□□ 0.93
Prpf38bQ80SY5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38bQ80SY5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38bQ80SY5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf38bQ80SY5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf38bQ80SY5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf38bQ80SY5 Gm22325-201ENSMUST00000158904 308 ntBASIC20.88■□□□□ 0.93
Prpf38bQ80SY5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Prpf38bQ80SY5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf38bQ80SY5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf38bQ80SY5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Prpf38bQ80SY5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf38bQ80SY5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf38bQ80SY5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf38bQ80SY5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf38bQ80SY5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf38bQ80SY5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf38bQ80SY5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Prpf38bQ80SY5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Prpf38bQ80SY5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Prpf38bQ80SY5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.87■□□□□ 0.93
Prpf38bQ80SY5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.86■□□□□ 0.93
Prpf38bQ80SY5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms