Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scube3Q66PY1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scube3Q66PY1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scube3Q66PY1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.13■□□□□ 0.97
Scube3Q66PY1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scube3Q66PY1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scube3Q66PY1 Gm43137-201ENSMUST00000198052 594 ntBASIC21.13■□□□□ 0.97
Scube3Q66PY1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.13■□□□□ 0.97
Scube3Q66PY1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scube3Q66PY1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scube3Q66PY1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scube3Q66PY1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scube3Q66PY1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scube3Q66PY1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scube3Q66PY1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scube3Q66PY1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Scube3Q66PY1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scube3Q66PY1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scube3Q66PY1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.1■□□□□ 0.97
Scube3Q66PY1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Scube3Q66PY1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Scube3Q66PY1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scube3Q66PY1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scube3Q66PY1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Scube3Q66PY1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.09■□□□□ 0.97
Scube3Q66PY1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scube3Q66PY1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.09■□□□□ 0.97
Scube3Q66PY1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scube3Q66PY1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scube3Q66PY1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scube3Q66PY1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scube3Q66PY1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scube3Q66PY1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scube3Q66PY1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scube3Q66PY1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.08■□□□□ 0.97
Scube3Q66PY1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.08■□□□□ 0.97
Scube3Q66PY1 Gm45417-201ENSMUST00000209533 758 ntBASIC21.08■□□□□ 0.97
Scube3Q66PY1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scube3Q66PY1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scube3Q66PY1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scube3Q66PY1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scube3Q66PY1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Scube3Q66PY1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Scube3Q66PY1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scube3Q66PY1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
Scube3Q66PY1 Mir6236-201ENSMUST00000184437 123 ntBASIC21.07■□□□□ 0.96
Scube3Q66PY1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
Scube3Q66PY1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Scube3Q66PY1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scube3Q66PY1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scube3Q66PY1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scube3Q66PY1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scube3Q66PY1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scube3Q66PY1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scube3Q66PY1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Scube3Q66PY1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scube3Q66PY1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scube3Q66PY1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scube3Q66PY1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scube3Q66PY1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scube3Q66PY1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scube3Q66PY1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scube3Q66PY1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scube3Q66PY1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scube3Q66PY1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scube3Q66PY1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scube3Q66PY1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scube3Q66PY1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Scube3Q66PY1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scube3Q66PY1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.05■□□□□ 0.96
Scube3Q66PY1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scube3Q66PY1 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.04■□□□□ 0.96
Scube3Q66PY1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scube3Q66PY1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scube3Q66PY1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scube3Q66PY1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms