Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VcanQ62059 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VcanQ62059 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.25■□□□□ 0.67
VcanQ62059 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VcanQ62059 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VcanQ62059 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VcanQ62059 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VcanQ62059 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VcanQ62059 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VcanQ62059 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VcanQ62059 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VcanQ62059 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VcanQ62059 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VcanQ62059 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VcanQ62059 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VcanQ62059 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VcanQ62059 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VcanQ62059 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VcanQ62059 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.23■□□□□ 0.67
VcanQ62059 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VcanQ62059 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VcanQ62059 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VcanQ62059 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VcanQ62059 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VcanQ62059 Gm13234-201ENSMUST00000120010 747 ntBASIC19.22■□□□□ 0.67
VcanQ62059 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VcanQ62059 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VcanQ62059 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.22■□□□□ 0.67
VcanQ62059 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VcanQ62059 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VcanQ62059 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VcanQ62059 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VcanQ62059 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VcanQ62059 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.21■□□□□ 0.67
VcanQ62059 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.21■□□□□ 0.67
VcanQ62059 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.21■□□□□ 0.67
VcanQ62059 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VcanQ62059 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VcanQ62059 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VcanQ62059 Gm43530-201ENSMUST00000195920 274 ntBASIC19.21■□□□□ 0.67
VcanQ62059 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
VcanQ62059 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.2■□□□□ 0.66
VcanQ62059 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VcanQ62059 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VcanQ62059 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
VcanQ62059 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VcanQ62059 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VcanQ62059 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VcanQ62059 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
VcanQ62059 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VcanQ62059 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VcanQ62059 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
VcanQ62059 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.19■□□□□ 0.66
VcanQ62059 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VcanQ62059 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VcanQ62059 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VcanQ62059 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.19■□□□□ 0.66
VcanQ62059 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VcanQ62059 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VcanQ62059 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VcanQ62059 Gm7514-201ENSMUST00000209475 934 ntBASIC19.18■□□□□ 0.66
VcanQ62059 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VcanQ62059 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.18■□□□□ 0.66
VcanQ62059 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VcanQ62059 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VcanQ62059 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VcanQ62059 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.18■□□□□ 0.66
VcanQ62059 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VcanQ62059 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.17■□□□□ 0.66
VcanQ62059 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.17■□□□□ 0.66
VcanQ62059 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VcanQ62059 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
VcanQ62059 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VcanQ62059 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.17■□□□□ 0.66
VcanQ62059 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VcanQ62059 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VcanQ62059 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VcanQ62059 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VcanQ62059 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.16■□□□□ 0.66
VcanQ62059 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VcanQ62059 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VcanQ62059 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VcanQ62059 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.15■□□□□ 0.66
VcanQ62059 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VcanQ62059 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VcanQ62059 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VcanQ62059 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VcanQ62059 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.15■□□□□ 0.66
VcanQ62059 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VcanQ62059 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VcanQ62059 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VcanQ62059 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
VcanQ62059 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
VcanQ62059 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VcanQ62059 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VcanQ62059 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
VcanQ62059 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
VcanQ62059 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VcanQ62059 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
VcanQ62059 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms