Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Znf235Q61116 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.31■■□□□ 1
Znf235Q61116 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Znf235Q61116 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.31■■□□□ 1
Znf235Q61116 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Znf235Q61116 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.31■■□□□ 1
Znf235Q61116 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.31■■□□□ 1
Znf235Q61116 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.31■■□□□ 1
Znf235Q61116 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Znf235Q61116 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Znf235Q61116 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Znf235Q61116 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Znf235Q61116 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Znf235Q61116 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Znf235Q61116 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.3■■□□□ 1
Znf235Q61116 Gm18284-201ENSMUST00000172604 624 ntBASIC21.3■■□□□ 1
Znf235Q61116 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.3■■□□□ 1
Znf235Q61116 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Znf235Q61116 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.3■■□□□ 1
Znf235Q61116 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.3■■□□□ 1
Znf235Q61116 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Znf235Q61116 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.3■■□□□ 1
Znf235Q61116 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Znf235Q61116 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.29■■□□□ 1
Znf235Q61116 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.29■■□□□ 1
Znf235Q61116 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Znf235Q61116 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf235Q61116 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.29■■□□□ 1
Znf235Q61116 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.29■■□□□ 1
Znf235Q61116 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.29■■□□□ 1
Znf235Q61116 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf235Q61116 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf235Q61116 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Znf235Q61116 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf235Q61116 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Znf235Q61116 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Znf235Q61116 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Znf235Q61116 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.28■■□□□ 1
Znf235Q61116 Gm26833-201ENSMUST00000180899 440 ntBASIC21.28■■□□□ 1
Znf235Q61116 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf235Q61116 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf235Q61116 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Znf235Q61116 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Znf235Q61116 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.28■■□□□ 1
Znf235Q61116 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Znf235Q61116 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Znf235Q61116 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Znf235Q61116 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf235Q61116 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf235Q61116 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf235Q61116 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Znf235Q61116 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf235Q61116 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Znf235Q61116 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf235Q61116 Gm8495-201ENSMUST00000188740 694 ntBASIC21.26■□□□□ 0.99
Znf235Q61116 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf235Q61116 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Znf235Q61116 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Znf235Q61116 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Znf235Q61116 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf235Q61116 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Znf235Q61116 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.25■□□□□ 0.99
Znf235Q61116 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.25■□□□□ 0.99
Znf235Q61116 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.25■□□□□ 0.99
Znf235Q61116 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Znf235Q61116 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf235Q61116 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Znf235Q61116 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Znf235Q61116 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Znf235Q61116 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Znf235Q61116 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Znf235Q61116 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
Znf235Q61116 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Znf235Q61116 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Znf235Q61116 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Znf235Q61116 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Znf235Q61116 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Znf235Q61116 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Znf235Q61116 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Znf235Q61116 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Znf235Q61116 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Znf235Q61116 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Znf235Q61116 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Znf235Q61116 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Znf235Q61116 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Znf235Q61116 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Znf235Q61116 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Znf235Q61116 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Znf235Q61116 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Znf235Q61116 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Znf235Q61116 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Znf235Q61116 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Znf235Q61116 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Znf235Q61116 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Znf235Q61116 Gm43060-201ENSMUST00000200621 289 ntBASIC21.21■□□□□ 0.99
Znf235Q61116 Gm40848-201ENSMUST00000221998 324 ntBASIC21.21■□□□□ 0.99
Znf235Q61116 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Znf235Q61116 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Znf235Q61116 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Znf235Q61116 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms